TABLE 1.
Optimization of PCR primers.
| Observed | Expected | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Johnson ID | clbN (733 bp) |
cdtB (466 bp) |
clbB (579 bp) |
cnf1 (974 bp) |
uidA (503 bp) |
clbN (733 bp) |
cdtB (466 bp) |
clbB (579 bp) |
cnf1 (974 bp) |
uidA (503 bp) |
| 1 | + | + | + | + | + | + | + | + | ||
| 2 | + | + | + | + | + | + | + | + | ||
| 3 | + | + | + | + | + | + | + | + | ||
| 4 | + | + | + | + | + | + | + | + | ||
| 5 | + | + | ||||||||
| 6 | + | + | ||||||||
| 7 | + | + | ||||||||
| 8 | + | + | + | + | + | + | ||||
| 9 | + | + | ||||||||
Note: Escherichia coli strains with listed genotypes, and results, were used to construct the multiplex assay. Strains were courtesy of Dr. James Johnson at the University of Minnesota.
Abbreviation: PCR, polymerase chain reaction.