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. Author manuscript; available in PMC: 2023 Jul 24.
Published in final edited form as: Nat Protoc. 2023 Feb 8;18(4):1296–1315. doi: 10.1038/s41596-023-00803-0

Table 3.

Troubleshooting of the UHPLC-EISA-TOF method for the quantification of DL-2-HG in biological samples

Step Problem Observation Possible reason Solution
Derivatization (Step 16) Derivatization did not work Standards or samples do not turn into yellow or brownish color Not all water was evaporated. Alternatively, it could also be possible that the sample is not very concentrated and thus the color is not that noticeable. Make sure all water has been evaporated before adding L-DATAN solution.
Liquid chromatography instrument (Steps 24–26) High column backpressure Pressure near 400 bar and/or low reproducibility of the retention time Column may be clogged Clean the column using 2-propanol. If the problem persists, replace the column
Pressure fluctuation The pressure is not constant Valve or pump seal leaks and might be damaged Replace the check valve and the pump seals
Loss of chiral separation The resolution of the peaks is lower than expected Mobile phase A and B are not prepared correctly or column is defective Make sure mobile phase A and B are well prepared and/or replace the column
Mass spectrometry instrument (Steps 21–23) No peaks appear Ions of the compound are not observed Some parameters are not set correctly setup and/or the derivatization step was not successful Check the MS parameters and/or make sure the derivatization was conducted in the proper way
Poor mass accuracy Peaks are not observed when they are extracted with a width of m/z ±0.01 The system is not well calibrated Calibrate the MS detector according to the manufacturer’s instructions
Loss of sensitivity Ion counts are too low The ion source may be contaminated Clean the ion source, spray shield and the glass capillary following the manufacturer’s instructions