Key resources table
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies - mouse | ||
| KLRG1 – BV421 | Biolegend | Cat#138414, RRID: AB_2565613 |
| CD3 – BV510 | Biolegend | Cat#100353, RRID: AB_2565879 |
| PD-1 – BV605 | Biolegend | Cat#135220, RRID: AB_2562616 |
| CD19 – BV650 | Biolegend | Cat#115541, RRID: AB_11204087 |
| CX3CR1 – BV711 | Biolegend | Cat#149031, RRID: AB_2565939 |
| FOXP3 – FITC | eBioscience | Cat#11-5773-82, RRID: AB_465243 |
| CD4 – PE-D594 | Biolegend | Cat#100566, RRID: AB_2563685 |
| CD8 – BB700 | BD Biosciences | Cat#566409, RRID: AB_2744467 |
| CD103 – BV421 | Biolegend | Cat#121421, RRID: AB_2562901 |
| JAML – APC | Miltenyi | Cat#130-114-680, |
| CD25 – BB700 | BD Biosciences | Cat#566498, RRID: AB_2744345 |
| 4-1BB – PE | Biolegend | Cat#106106, RRID: AB_2287565 |
| CD69 – BV786 | Biolegend | Cat#104543, RRID: AB_2629640 |
| CXADR – A647 | BEI Resources | NR-9216, RRID: N/A |
| Antibodies - human | ||
| ICOS – BV786 | Biolegend | Cat#313534, RRID: AB_2629729 |
| GITR – BV711 | Biolegend | Cat#371212, RRID: AB_2687161 |
| PD-1 – BV421 | BD Biosciences | Cat#562584, RRID: AB_2737668 |
| 4-1BB – APC | Biolegend | Cat#309810, RRID: A AB_830672 |
| CD25 – PE | BD Biosciences | Cat#555432, RRID: AB_395826 |
| CD69 – BV605 | Biolegend | Cat#310938, RRID: AB_2562307 |
| Chemicals, peptides, and recombinant proteins | ||
| CXADR Fc | R&D Systems | Cat#3336-CX-050 RRID: N/A |
| Deposited data | ||
| Raw and analyzed data | This paper | GEO: GSE185162 |
| Experimental models: Cell lines | ||
| MC38-OVA | Peter MacCallum cancer center | N/A |
| B16F10-OVA | LJI | N/A |
| Experimental models: Organisms/strains | ||
| C57BL/6J | Jackson Laboratories | #000664 |
| OT-I | Jackson Laboratories | #003831 |
| CD45.1 | Jackson Laboratories | #002014 |
| CD8−/− | Jackson Laboratories | #002665 |
| TCF7GFP flox | Jackson Laboratories | #030909 |
| Software and algorithms | ||
| Cell Ranger 3.1.0 | 10x Genomics | https://support.10xgenomics.com/single-cell-gene-expression/software/downloads/latest |
| bcl2fastq2 v2.20 | illumina | https://support.illumina.com/sequencing/sequencing_software/bcl2fastq-conversion-software.html |
| Scrublet 0.2.3 | Wolock et al. | https://github.com/swolock/scrublet |
| Seurat 3.1.5 | Stuart et al. | https://github.com/satijalab/seurat |
| Other | ||
| Analysis code | This paper | https://github.com/vijaybioinfo/JAML_reproducibility |