TABLE 3.
Primers used in this study
| Primer | Sequence (5′–3′)a |
|---|---|
| 27 | AGGTGATGAAGCCGCTCGA |
| 40 | GTCAACGACTAGGACATAAG |
| 85 | GATAGATAAGTATTAGTGATAGG |
| 241 | TTTTTCTGCAGGTAGATTTAGCTCTATTTGAAAC |
| 271 | CTCGGCGCATACTTCTTTAC |
| 425 | AGGGGTTCGTATTTCGTGACTC |
| 427 | TAATACCGTTGTTTTGCT TGG |
| 460 | GCCTTGATAGGAGCATTATAATG |
| 663 | ACGACGATTATACAAAAATGAAGC |
| 1160 | taggcggccgcacttagtatgGATGCACTGAATAATTGAGATACC |
| 1194 | TTATGTGCGAGGCCTAATGC |
| 1221 | taggcggccgcacttagtatgGTCTTCGACTAATAATACTTTCTG |
| 1223 | GAATGTCTTGCTAAGTACCTG |
| 1487 | GGTCGTGGGGAGTTTTATCC |
| 1500 | CCACCATCACGATTACGAAC |
| 2089 | CCATACTTAGTGCGGCCGCCTA |
| 2090 | CCATGGCCTTCTAGGCCTATCC |
| 2155 | ATCTCTTGAGCACTTGTTTGAG |
| 2156 | taggcggccgcactaagtatggAATAATCCCTTTCATAAACACTCC |
| 2157 | ggataggcctagaaggccatggAAATCATAAACGATTAAGGCGGG |
| 2158 | TCGCGCCACATTGTATTTGG |
| 2185 | CTTGATTTATACAGCGAAGGAG |
| 2263 | taggcggccgcactaagtatggATTCATGATTACACCACTGTTG |
| 2264 | ggataggcctagaaggccatggCCCAATGACGATGCATTATTGC |
| 2264 | ggataggcctagaaggccatggCCCAATGACGATGCATTATTGC |
| 2289 | AATTGCTGTTGAAGCATCTCTG |
| 2290 | AAGAAACCGATACCGTTTACG |
| 2291 | CAGGTAAAGGGCATTTAACG |
| 2297 | ggataggcctagaaggccatggAAACAAGGTTTCTCAAAATAAAAG |
| 2331 | tatccatatgatgttccagattatgcataaCCATACTTAGTGCGGCCGCCTA |
| 2348 | taggcggccgcactaagtatggaTTATGCATAATCTGGAACATCATATGGATAttttgagaaaccttgtttatttc |
| 2354 | gattataaagatgatgatgataaataaCCATACTTAGTGCGGCCGCCTA |
| 2437 | ggataggcctagaaggccatggGAAGCCTATGAAGAATCGGAATGATG |
| 2822 | catggtcatagctgtttcctGCTTATCTAATCCAAATAATTTAAC |
| 2918 | TGCTTCACGAATTACTCCCC |
| 2919 | taggcggccgcactaagtatggAATGATTGTGATAAGGCTATAACG |
| 2920 | ggataggcctagaaggccatggAAGTATGAAACACAATAAACTTCG |
| 2921 | GTACGATTGTAGGCTTAACTCG |
| 2938 | taggcggccgcactaagtatggATATTGTTTTACAGGATGGTTCCTCG |
| 2965 | ggataggcctagaaggccatggCGAATTACTCCCCTAATTACGAAC |
| 2966 | catggtcatagctgtttcctTGCATTAGCTCCTATAAAATAGTC |
| 2967 | taggcggccgcactaagtatggATTAAGCGTATTCAAGAACATTCG |
| 2968 | ggataggcctagaaggccatggCGAGCATTTTCTACAACATGTG |
| 3083 | ggataggcctagaaggccatggAGCTTCTTCCTTATAGTTATGATG |
| 3138 | ttatttatcatcatcatctttataatcTTGTGTTTCATACTTCTCTAATAATC |
| 3139 | ggataggcctagaaggccatggACTTCGTCATAAAAAAAGGAGCAC |
| 3141 | taggcggccgcactaagtatgga |
| 3292 | ttatgcataatctggaacatcatatggataTTGTGTTTCATACTTCTCTAATAATC |
| 3297 | ttatgcataatctggaacatcatatggataATGCGTTGTTTTATTAACAGGAATTG |
| 3350 | aataatagctcattatccatTGCATCATCTGAAAGTTTATATTTAG |
| 3351 | taaactttcagatgatgcaATGGATAATGAGCTATTATTAGTAG |
| 4067 | ttatttatcatcatcatctttataatcTTTTGAGAAACCTTGTTTATTTC |
| 4111 | gagtttttatcgtttcagattgggtATATTGTTTTACAGGATGGTTCCTCG |
| 4112 | cgaggaaccatcctgtaaaacaatatACCCAATCTGAAACGATAAAAACTC |
| 4238 | CAACTATGAGCCAgGAGTTAAGGACACCTCTTAATG |
| 4239 | GTCCTTAACTCcTGGCTCATAGTTGCTAAAAACG |
a
Lowercase letters denote nonnative or tail sequences.