TABLE 3.
Presence of the different i6A derivatives in the tRNA of S. typhimurium carrying wild-type and mutant miaB alleles
Strain | Relevant genotypea | Plasmid | Growth temp (°C) | Ratio of i6A derivativeb to m2A
|
|||
---|---|---|---|---|---|---|---|
i6A | io6A | ms2i6A | ms2io6A | ||||
GT2734 | miaB2508::Tn10dCm | 37 | 0.55 | 0.068 | — | — | |
GT5441 | miaB2508::Tn10dCm | pUST138 | 37 | 0.008 | 0.006 | 0.12 | 0.48 |
GT5442 | miaB2508::Tn10dCm | pBluescript SK | 37 | 0.45 | 0.057 | — | — |
GT1825 | miaB+ | 37 | 0.007 | 0.007 | 0.19 | 0.48 | |
41 | 0.012 | 0.029 | — | 0.83 | |||
GT3828 | miaB26 | 37 | 0.060 | 0.007 | 0.21 | 0.37 | |
41 | 0.36 | 0.008 | — | 0.075 | |||
GT3830 | miaB27 | 37 | 0.45 | — | — | — | |
41 | 0.42 | — | — | — | |||
GT3831 | miaB28 | 37 | 0.44 | — | — | — | |
41 | 0.43 | 0.010 | — | — | |||
GT3833 | miaB29 | 37 | 0.43 | 0.013 | — | — | |
41 | 0.41 | — | — | — | |||
TT2342 | miaB+ zbf-99::Tn10 | 41 | 0.006 | 0.010 | 0.14 | 0.54 | |
GT5443 | miaB26 zbf-99::Tn10 | 41 | 0.36 | 0.008 | 0.070 | 0.077 | |
GT5444 | miaB27 zbf-99::Tn10 | 41 | 0.39 | 0.023 | — | — | |
GT5445 | miaB28 zbf-99::Tn10 | 41 | 0.37 | 0.025 | — | — | |
GT5446 | miaB29 zbf-99::Tn10 | 41 | 0.44 | 0.018 | — | — | |
GT5766 | miaB26 zbf-99::Tn10 | pUST190 | 41 | — | — | 0.21 | 0.44 |
GT5767 | miaB27 zbf-99::Tn10 | pUST190 | 41 | — | — | 0.21 | 0.46 |
GT5768 | miaB28 zbf-99::Tn10 | pUST190 | 41 | — | — | 0.23 | 0.44 |
GT5769 | miaB29 zbf-99::Tn10 | pUST190 | 41 | — | — | 0.19 | 0.45 |
See Table 1 for complete genotypes.
The i6A derivative present in the largest amount in each strain is shown in bold letters. —, not detected. Compounds present at amounts lower than 0.005 (less than 1% of the total amount of i6A-derivatives) cannot be detected.