Figure 1.
Boxplots showing the sensitivity (green), specificity (blue), and PPV (red) of each transmission reconstruction model for predicting known transmission events in 20 simulated tuberculosis outbreaks. Links with a probability of ≥0.5 are considered. The results when transmission links between pairs in any direction are shown for Phybreak simulations in (a) and TransPhylo+SeqGen simulations in (b). The results when transmission links are predicted with the correct donor–recipient direction are shown for Phybreak simulations in (c) and TransPhylo+SeqGen simulations in (d).