Table 2.
Summary statistics for eQTL mapping analyses.
| Analysis | eQTL Type | N eQTL Peaks | N genes with eQTL | Total N unique genes with eQTL | % Genes with 1 eQTL peak | Mean Percent Variance (range) |
|---|---|---|---|---|---|---|
|
| ||||||
| Gut-Control | cis | 1784 | 1779 | 1993 | 96% | 43.1 (25.0–74.4) |
| Gut-Control | trans | 295 | 286 | 33.7 (10.4–63.0) | ||
|
| ||||||
| Gut-Copper | cis | 1677 | 1674 | 1860 | 97% | 42.4 (22.0–76.0) |
| Gut-Copper | trans | 248 | 237 | 33.4 (21.2–68.2) | ||
|
| ||||||
| Gut-Response | cis | 139 | 138 | 316 | 98% | 40.0 (25.5–72.5) |
| Gut-Response | trans | 183 | 180 | 32.3 (16.6–41.9) | ||
|
| ||||||
| Head-Control | cis | 1875 | 1869 | 2125 | 96% | 43.6 (22.8–76.8) |
| Head-Control | trans | 334 | 320 | 33.4 (18.3–66.4) | ||
|
| ||||||
| Head-Copper | cis | 1879 | 1870 | 2152 | 97% | 43.6 (23.9–78.1) |
| Head-Copper | trans | 351 | 343 | 34.2 (20.5–67.4) | ||
|
| ||||||
| Head-Response | cis | 34 | 34 | 197 | 83% | 34.3 (21.3–64.3) |
| Head-Response | trans | 235 | 167 | 30.0 (18.8–37.5) | ||