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Region of homology between Thiohalocapsa phage MD04 and its host. Locally colinear blocks aligned with Mauve (66) are shown in red, with traces inside representing nucleotide similarity. Genome tracks show genome coordinates and ORFs. Conserved 17 bp direct repeat (DR) sequences are shown in blue. A single-nucleotide insertion (green) in the Thiohalocapsa ORF N838_07070 results in a premature stop codon and a pseudogene annotation.
