Table 3. General statistics on ChIPmentation libraries.

All libraries were downsampled to 3.8 M uniquely aligned reads.

Sample	Pos	Equivalent miracidia	Equivalent cells	Amplification cycles	qBit DNA HS ng/µl	Read pairs	Uniquely aligned	After deduplication	% unique non-dup	% to keep for 3.8 M
C1	L1	10,000	1,000,000	17	23.2	5,728,173	7,969,894	6,775,525	59	56
	R1	10,000	1,000,000	18	21.2	8,388,53	13,469,770	10,007,402	60	38
C3	L3	100	10,000	18	25.2	12,537,243	19,157,585	14,417,614	57	26
	R3	100	10,000	19	30.4	8,665,837	13,838,684	8,409,793	49	45
C5	L5	10	1,000	19	13.8	11,436,716	17,920,411	8,664,467	38	44
	R5	10	1,000	20	19.3	11,109,380	17,854,360	7,214,153	32	53
C7	L7	1	100	22	22.0	11,662,120	15,737,202	4,095,477	18	93
	R7	1	100	22	11.9	10,566,906	15,221,913	3,827,034	18	99