Table 1. Covalent binding energies of the compounds to human XPO1 (CRM1).
Crystal structures used | |||
Protein database (PDB) ID | 7L5E | 4HAT | 6TVO |
Ligand in crystal structure | Selinexor | Leptomycin B | Leptomycin B |
Compound | Binding energy score (S) (kcal/mol) a | ||
Selinexor | –6.80 | –6.49 | –5.78 |
4-Octyl itaconate | –5.05 | –4.98 | –4.8 to –5.6 |
Sulforaphane | –4.10 | –4.22 | –4.09 |
Bardoxolone methyl (reaction at C9) | –1.88 | –1.12 | –3.70 |
Bardoxolone methyl (reaction at C1) | – b | – b | – b |
a Compounds arranged according to descending score values
b Docking unsuccessful.