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. 2023 Jul 13;11:1200729. doi: 10.3389/fbioe.2023.1200729

TABLE 2.

A summary of the structural characteristics for some artificial NVPNs. The indicated code corresponds to the respective PDB ID.

Protein nanocages Structural characteristics References
Number of monomers Molecular weight Geometry Dimensions a
16-nm protein nanocages designed (3VDX, Figure 2A) 12 600 kDa Tetrahedral OD: 16 nm; ID: n.a Lai et al. (2012a)
His6-HuHF and His6-SF nanocages (7CPC, Figure 2B) 24 514 kDa Octahedral OD: 12 nm; ID: n.a Gu et al. (2020)
trp RNA-binding attenuation protein (TRAP) nanocages (6RVW, Figure 2C) 24 2.2 MDa Octahedral OD: 22 nm; ID: 16 nm Heddle et al. (2006), Heddle et al. (2007), Malay et al. (2019), Naskalska et al. (2021), Majsterkiewicz et al. (2022), Stupka et al. (2022)
I3-01 nanocages (8ED3, Figure 2D) 60 1.3 MDa Icosahedral OD: 26 nm; ID: n.a Hsia et al. (2016), Votteler et al. (2016), Bruun et al. (2018), McCarthy and Gonen (2022), SIB Swiss Institute of Bioinformatics (2023)
Prototype oxygen-impermeable protein nanocages (OIPNC) (7WKC, Figure 2E) n.a n.a Icosahedral OD: 14 nm; ID: n.a Gao et al. (2022)
TIP60 nanocages (7EQ9; Figure 2F) 60 1.1 MDa Icosahedral OD: 21.7–24.7 nm; ID: 15 nm Kawakami et al. (2018), Obata et al. (2021), Ohara et al. (2023)
a

OD, outer diameter; ID, inner diameter; n.a, not available.