TABLE 2.
Hydrogen bond occupancy of W50–Y69 and Y68–E101 (human)/Y68–E85 (mouse) in the human and mouse MEIG1–PACRG complex.
| Model No. | Organism | Mutation | W50–Y69 hydrogen bond occupancy (%) | Y68–E101/E85 hydrogen bond occupancy (%) |
|---|---|---|---|---|
| 1 | Human | Wild type | 57.10 | 79.43 |
| 2 | Human | Wild type | 56.72 | 97.84 |
| 3 | Human | W50A | 0 | 69.96 |
| 4 | Human | W50A | 0 | 92.92 |
| 5 | Human | Y68A | 58.38 | 0 |
| 6 | Human | Y68A | 57.24 | 0 |
| 15 | Mouse | Wild type | 52.45 | 78.77 |
| 16 | Mouse | Wild type | 51.31 | 90.22 |
| 17 | Mouse | W50A | 0 | 93.69 |
| 18 | Mouse | W50A | 0 | 95.04 |
| 19 | Mouse | Y68A | 59.74 | 0 |
| 20 | Mouse | Y68A | 59.91 | 0 |
Note: Data is given as the percentage of frames in GaMD trajectories that have hydrogen bonds.
Abbreviations: GaMD, Gaussian-accelerated molecular dynamics; MEIG1, meiosis-expressed gene 1; PACRG, Parkin co-regulated gene.