Skip to main content
. 2023 Jul 10;12(7):979. doi: 10.3390/biology12070979

Table 2.

Descriptive statistics for genetic diversity 1 in the studied breeds (populations) based on SNP genotypes.

Breed HO (M ± SE) HE (M ± SE) UHE (M ± SE) AR (M ± SE) FIS [CI 95%] UFIS [CI 95%]
Old Russian indigenous breeds
OMF 0.291 ± 0.001 0.286 ± 0.001 0.291 ± 0.001 1.709 ± 0.002 −0.019 [−0.021; −0.017] −0.001 [−0.003; 0.001]
PC 0.257 ± 0.001 0.249 ± 0.001 0.255 ± 0.001 1.655 ± 0.002 −0.029 [−0.031; −0.027] −0.003 [ −0.005; −0.001]
RBB 0.250 ± 0.001 0.247 ± 0.001 0.252 ± 0.001 1.624 ± 0.002 −0.008 [−0.010; −0.006] 0.012 [0.010; 0.014]
RC 0.325 ± 0.001 0.327 ± 0.001 0.333 ± 0.001 1.819 ± 0.002 0.005 [0.003; 0.007] 0.022 [0.020; 0.024]
Ush 0.249 ± 0.001 0.255 ± 0.001 0.259 ± 0.001 1.647 ± 0.002 0.016 [0.014; 0.018] 0.033 [0.031; 0.035]
YC 0.347 ± 0.001 0.358 ± 0.001 0.363 ± 0.001 1.867 ± 0.001 0.029 [0.027; 0.031] 0.043 [0.041; 0.045]
Av. 0.287 ± 0.017 0.287 ± 0.019 0.292 ± 0.019 1.720 ± 0.041 −0.001 ± 0.009
[−0.031; 0.031]		 0.018 ± 0.008
[−0.005; 0.045]
Improved Russian breeds
AS 0.321 ± 0.001 0.329 ± 0.001 0.335 ± 0.001 1.811 ± 0.002 0.020 [0.018; 0.022] 0.037 [0.035; 0.039]
KJ 0.256 ± 0.001 0.252 ± 0.001 0.256 ± 0.001 1.665 ± 0.002 −0.018 [−0.020; −0.016] 0.000 [−0.002; 0.002]
Kt 0.257 ± 0.001 0.256 ± 0.001 0.261 ± 0.001 1.650 ± 0.002 −0.006 [−0.008; −0.004] 0.012 [0.010; 0.014]
LMF 0.249 ± 0.001 0.228 ± 0.001 0.246 ± 0.001 1.606 ± 0.002 −0.090 [−0.094; −0.086] −0.011 [−0.015; −0.007]
Pm 0.291 ± 0.001 0.290 ± 0.001 0.295 ± 0.001 1.729 ± 0.002 −0.006 [−0.008; −0.004] 0.011 [0.009; 0.013]
RW1 0.255 ± 0.001 0.248 ± 0.001 0.252 ± 0.001 1.632 ± 0.002 −0.016 [−0.018; −0.014] 0.001 [−0.001; 0.003]
RW2 0.306 ± 0.001 0.305 ± 0.001 0.307 ± 0.001 1.763 ± 0.002 −0.001 [−0.002; 0.000] 0.006 [0.005; 0.007]
UshF 0.252 ± 0.001 0.232 ± 0.001 0.253 ± 0.001 1.645 ± 0.003 −0.088 [−0.092; −0.084] 0.003 [−0.001; 0.007]
ZS 0.275 ± 0.001 0.271 ± 0.001 0.276 ± 0.001 1.688 ± 0.002 −0.015 [−0.017; −0.013] 0.004 [0.002; 0.006]
Av. 0.274 ± 0.009 0.268 ± 0.011 0.276 ± 0.010 1.688 ± 0.022 −0.024 ± 0.013
[−0.094; 0.022]		 0.007 ± 0.004
[−0.015; 0.039]
Specialized foreign breeds
AoB 0.296 ± 0.001 0.314 ± 0.001 0.319 ± 0.001 1.777 ± 0.002 0.045 [0.043; 0.047] 0.061 [0.059; 0.063]
CW 0.365 ± 0.001 0.368 ± 0.001 0.371 ± 0.001 1.876 ± 0.001 0.001 [−0.001; 0.003] 0.022 [0.020; 0.024]
NH 0.233 ± 0.001 0.205 ± 0.001 0.216 ± 0.001 1.542 ± 0.002 −0.122 [−0.125; −0.119] −0.067 [−0.070; −0.064]
RIR 0.256 ± 0.001 0.256 ± 0.001 0.264 ± 0.001 1.661 ± 0.002 −0.003 [−0.006; 0.000] 0.027 [0.024; 0.030]
WL 0.164 ± 0.001 0.185 ± 0.001 0.185 ± 0.001 1.452 ± 0.002 0.080 [0.077; 0.083] 0.103 [0.100; 0.106]
Av. 0.263 ± 0.033 0.266 ± 0.033 0.271 ± 0.034 1.662 ± 0.077 0.000 ± 0.034
[−0.125; 0.083]		 0.029 ± 0.028
[−0.070; 0.106]

1 HO, observed heterozygosity; M, mean value; SE, standard error; HE, expected heterozygosity; UHE, unbiased expected heterozygosity%]; AR, rarefied allelic richness; FIS, inbreeding coefficient [CI 95%, range variation of UFIS coefficient at a confidence interval of 95%]; UFIS, unbiased inbreeding coefficient; Av., average (M ± SE). All pairwise breed differences were significant at p < 0.001. Breed codes are given in Table 1.