Table 2.
Length | Sequence Composition | |
---|---|---|
RF | 3133 | E1(124 $+43)+E2(227)+E3(115)+E4(65)+E5(102)+E6(100)+E7(179)+E8(33)+E9(52)+E10(74)+E11(78)+E12(135)+E13(135)+E14(96)+E15(73)+E16(89)+E17(117)+E18(144)+E19(102)+E20(72)+E21(1102+494 $) |
RT-1 | 1688 | E2 +E3~4+E5[1~63]+E10[9~74]+E11~21 |
RT-2 | 325 | E2[30~220]+E21[8~141] |
RT-3 | 1566 | E2[30~163]&[190~220]+E3~11+E12[1~48]+E17[29~117]+E18~21 |
RT-4 | 1594 | E2+E3~11+E12[1~53]+ E17[32~117]+E18~21 |
PB-1 | 1916 | E1~4+E5[1~72bp]+E21[213~1596] |
PB-2 | 2419 | E1+E2[1~178]+E15[10~73]+E16~21 |
PB-3 | 2942 | E1~15+E16[1~68]+E21[245~1596] |
PB-4 | 3060 | E2[114~227]+E3~13+E18[1~15]+E21[109~1596] |
PB-5 | 2619 | E1~16+E17[1~83]+E21[667~1596] |
PB-6 | 2439 | E1~16+E17[1~43]+E21[807~1596] |
PB-7 | 1919 | E1~17+E18(1~72) |
PB-8 | 3421 | E1~10+E13~21 |
PB-9 | 3263 | E1+E2[1~178]+E3~11+E12[1~90]+E14[61~96]+E15~16+E17[1~103]+E18[74~144]+E19~21 |
PB-10 | 2593 | E1~18+E19[1~45]+E21[916~1596] |
PB-11 | 2855 | I1(27)+E2~19+E20[1~25]+E21[712~1596] |
PB-12 | 3802 | I1(216)+E2~21 |
PB-13 | 3613 | E1~7+E8[1~23]+E9[17~52]+E10~21 |
PB-14 | 3648 | E1~9+E10[10~74]+E11~13+I13(9)+E14~21 |
PB-15 | 3567 | E1~17+E18[1~137]+E19[65~102]+E20~21 |
PB-16 | 3482 | E1~20+E21[1~101]&[263~1596] |
PB-17 | 3024 | E1~20+E21[1~59]&[676~1596] |
PB-18 | 3786 | I1(299)+E2~20+E21[1~1363]&[1463~1596] |
PB-19 | 3240 | E1~20+E21[1~266]&[667~1596] |
PB-20 | 3538 | E1~20+E21[1~1429]&[1525~1596] |
RF, reference sequence (GenBank No. NM_001167629.2). RT, transcripts identified with RT-PCR method with primers amplifying the complete coding sequences, spanning from the 30th bp of Exon 2 to the 141st bp of Exon 21, of RF. PB, transcripts identified by PacBio sequencing. E, Exon; I, Intron. Figures in parentheses indicate length of the exon/intron, while those in brackets indicating nucleotide sequences spanning the region of the exon are included in the transcripts. Those exons without brackets indicate the sequences are the same as that in RF. $ The 124 and 494 bp is extended by PB sequencing in the 5′ and 3′ end, respectively.