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. 2023 Jun 29;13(7):1057. doi: 10.3390/biom13071057

Table 2.

Alternative splicing transcripts of porcine ACSL1.

Length Sequence Composition
RF 3133 E1(124 $+43)+E2(227)+E3(115)+E4(65)+E5(102)+E6(100)+E7(179)+E8(33)+E9(52)+E10(74)+E11(78)+E12(135)+E13(135)+E14(96)+E15(73)+E16(89)+E17(117)+E18(144)+E19(102)+E20(72)+E21(1102+494 $)
RT-1 1688 E2 +E3~4+E5[1~63]+E10[9~74]+E11~21
RT-2 325 E2[30~220]+E21[8~141]
RT-3 1566 E2[30~163]&[190~220]+E3~11+E12[1~48]+E17[29~117]+E18~21
RT-4 1594 E2+E3~11+E12[1~53]+ E17[32~117]+E18~21
PB-1 1916 E1~4+E5[1~72bp]+E21[213~1596]
PB-2 2419 E1+E2[1~178]+E15[10~73]+E16~21
PB-3 2942 E1~15+E16[1~68]+E21[245~1596]
PB-4 3060 E2[114~227]+E3~13+E18[1~15]+E21[109~1596]
PB-5 2619 E1~16+E17[1~83]+E21[667~1596]
PB-6 2439 E1~16+E17[1~43]+E21[807~1596]
PB-7 1919 E1~17+E18(1~72)
PB-8 3421 E1~10+E13~21
PB-9 3263 E1+E2[1~178]+E3~11+E12[1~90]+E14[61~96]+E15~16+E17[1~103]+E18[74~144]+E19~21
PB-10 2593 E1~18+E19[1~45]+E21[916~1596]
PB-11 2855 I1(27)+E2~19+E20[1~25]+E21[712~1596]
PB-12 3802 I1(216)+E2~21
PB-13 3613 E1~7+E8[1~23]+E9[17~52]+E10~21
PB-14 3648 E1~9+E10[10~74]+E11~13+I13(9)+E14~21
PB-15 3567 E1~17+E18[1~137]+E19[65~102]+E20~21
PB-16 3482 E1~20+E21[1~101]&[263~1596]
PB-17 3024 E1~20+E21[1~59]&[676~1596]
PB-18 3786 I1(299)+E2~20+E21[1~1363]&[1463~1596]
PB-19 3240 E1~20+E21[1~266]&[667~1596]
PB-20 3538 E1~20+E21[1~1429]&[1525~1596]

RF, reference sequence (GenBank No. NM_001167629.2). RT, transcripts identified with RT-PCR method with primers amplifying the complete coding sequences, spanning from the 30th bp of Exon 2 to the 141st bp of Exon 21, of RF. PB, transcripts identified by PacBio sequencing. E, Exon; I, Intron. Figures in parentheses indicate length of the exon/intron, while those in brackets indicating nucleotide sequences spanning the region of the exon are included in the transcripts. Those exons without brackets indicate the sequences are the same as that in RF. $ The 124 and 494 bp is extended by PB sequencing in the 5′ and 3′ end, respectively.