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. 2023 Jul 4;26(8):107253. doi: 10.1016/j.isci.2023.107253

Table 2.

Full-length h-fibroins of 11 caddisfly species derived from long-read sequencing ordered by silk usage

Species GenBank Accession Silk usage Gene length CDS Exon 1 Intron 1 Exon 2 Protein size Molecular weight (kD)
Atopsyche davidsoni37 OQ787677 cocoon 23,701 23,637 67 61 23,570 7,878 755.16
Himalospyche tibetanaa OQ983471 cocoon 20,892 19,233 36 1,656 19,197 6,411 628.28
Eubasilissa regina32 n.a., see32 case 25,256 25,161 40 92 25,121 8,386 815.86
Glyphotaelius pellucidusa BK063450 case 24,412 23,592 39 817 23,553 7,864 801.63
Hesperophylax magnus33 OQ787679 case 26,666 25,872 42 791 25,830 8,624 875.02
Limnephilus lunatusa BK063451 case 30,382 29,544 42 835 29,502 9,848 998.81
Limnephilus marmoratusa BK063452 case 27,154 26,322 42 829 26,280 8,774 882.45
Limnephilus rhombicusa BK063453 case 27,903 27,081 39 819 27,042 9,027 896.38
Leptonema lineaticornea OQ983470 retreat 20,538 20,451 42 84 20,409 6,817 675.22
Cheumatopsyche charitesa BK063449 retreat 18,745 18,669 42 73 18,627 6,223 633.908
Arctopsyche grandsis37 OQ787675 retreat 19,231 19,122 48 106 19,074 6,374 659.35

Gene length including introns and stop codon; CDS = protein coding DNA, gene length, CDS, exon, intron in bp; protein size in amino acids.

a

This study.