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. 2023 Jul 31;4(4):e315. doi: 10.1002/mco2.315

TABLE 2.

Published reports on multi‐omics discovery of natural drug targets.

Methods Compounds Targets Type of disease or model study Potential applications Ref
Transcriptomics and proteomics (DARTS) Arctigenin PP2A Diabetic kidney disease Hypertension; inflammation 243
Genomics and proteomics (DARTS) Ecumicin ClpC1 Tuberculosis Lead compounds for antituberculosis drugs 241
Chemical proteomics and bioinformatics (gene ontology) Baicalin CPT1 Obesity and hepatic steatosis Inflammation; antibacterial; obesity 242
Metabolomics and chemical proteomics (ABPP) Perfluorooctanoic acid Acaca, Acacb PFOA‐induced liver toxicity No 239
Proteomics (DARTS) and bioinformatics (gene docking) Bithionol NAD‐dependent dehydrogenases Cryptococcus neoformans Antifungal 237
ShRNA Aurilide B ATP1A1 Mitochondria‐mediated apoptosis No 244
SiRNA QS11 ARFGAP1 Breast cancer No 245
CRISPR Ispinesib Kinesin‐5 Human cancer cells Cancer 246
AI (machine learning) β‐Lapachone 5‐lipoxygenase Human cancer cells Cancer 247
AI (deep learning) Ziprasidone 5‐hydroxytryptamine receptor No No 248