Antibodies |
|
NeuN |
Abcam |
Cat# ab190195; RRID:AB_2716282
|
PV |
Abcam |
Cat# ab11427; RRID:AB_298032
|
SST |
Millipore Sigma |
Cat# MAB354; RRID:AB_2255365
|
CR |
Sigma-Aldrich |
Cat# C7479, RRID:AB_259024
|
PSD-95 |
Antibodies Incorporated |
Cat# 75-028; RRID:AB_2292909
|
GFP |
Thermo Fisher Scientific |
Cat# A-31852; RRID:AB_162553
|
Anti-rat Fab2 A488 |
Jackson ImmunoResearch |
Cat# 712-546-150; RRID:AB_2340685
|
Anti-rabbit Fab2 A594 |
Jackson ImmunoResearch |
Cat# 711-586-152; RRID:AB_2340622
|
Anti-mouse IgG2a A488 |
Thermo Fisher Scientific |
Cat# A-21131; RRID:AB_2535771
|
|
Chemicals, peptides, and recombinant proteins |
|
NaCl |
Sigma-Aldrich |
Cat# S3014 |
NaHCO3
|
Sigma-Aldrich |
Cat# S6014 |
NaH2PO4
|
Sigma-Aldrich |
Cat# S3139 |
KCl |
Sigma-Aldrich |
Cat# P3911 |
Glucose |
Sigma-Aldrich |
Cat# G7528 |
MgCl2
|
Sigma-Aldrich |
Cat# 63069 |
CaCl2
|
Sigma-Aldrich |
Cat# 21115 |
mannitol |
Sigma-Aldrich |
Cat# M4125 |
MgSO4
|
Sigma-Aldrich |
Cat# 83266 |
PBS |
Sigma-Aldrich |
Cat# P3813 |
acrylamide |
Sigma-Aldrich |
Cat# A9099 |
bisacrylamide |
Sigma-Aldrich |
Cat# M7279 |
potassium ferrocyanide |
Sigma-Aldrich |
Cat# 60279 |
NaN3
|
Sigma-Aldrich |
Cat# 71289 |
Tween 20 |
Sigma-Aldrich |
Cat# P9416 |
sodium cacodylate |
Electron Microscopy Sciences |
Cat# 12310 |
32% paraformaldehyde |
Electron Microscopy Sciences |
Cat# 15714 |
25% glutaraldehyde |
Electron Microscopy Sciences |
Cat# 16220 |
OsO4
|
Electron Microscopy Sciences |
Cat# 19191 |
thiocarbohydrazide |
Electron Microscopy Sciences |
Cat# 21900 |
uranyl acetate |
Electron Microscopy Sciences |
Cat# 22400 |
EMbed 812 (EPON) |
Electron Microscopy Sciences |
Cat# 14121 |
acetonitrile |
Electron Microscopy Sciences |
Cat# 10021 |
Hoechst 33342 solution |
Thermo Fisher Scientific |
Cat# 62249 |
Streptavidin A488 |
Thermo Fisher Scientific |
Cat# S11223
|
biotinylated WFA |
Adipogen |
Cat# VC-B-1355-M002 |
normal goat serum |
Gibco |
Cat# CN5000 |
Glycine |
Invitrogen |
Cat# 15527013 |
1N HCl |
Fisher Scientific |
Cat# SA48-500 |
EasyIndex solution (RI = 1.52) |
LifeCanvas |
N/A |
VA044 Thermal Polymerization Initiator |
Wako Chemicals |
N/A |
|
Experimental models: Organisms/strains |
|
C57BL/6J |
Jackson Laboratory |
strain# 000664 |
Thy1-YFP-16 |
Jackson Laboratory |
strain# 003709 |
Thy1-YFP-H |
Jackson Laboratory |
strain # 003782 |
Long-Evans |
Charles River Laboratories |
strain# 006 |
|
Software and algorithms |
|
VAST |
Berger et al.33
|
https://lichtman.rc.fas.harvard.edu/vast/ |