Table 1.
DNA deformation energies (kcal/mol) for the 6–35 b.p. region, calculated using a multivariate Ising model (Liebl and Zacharias, 2021)
| DNA | E2F1-DP1–CEBPB–DNA | CEBPB–DNA | E2F1-DP1–DNA | |
|---|---|---|---|---|
| WT | 120.0 ± 15.7 | 122.6 ± 15.7 | 125.5 ± 17.1 | 119.5 ± 15.6 |
| (2.6 / 0.09/b.p.) | (5.5 / 0.18/b.p.) | (−0.50 / −0.02/b.p.) | ||
| ME | 121.0 ± 15.8 | 132.3 ± 15.5 | 126.4 ± 15.4 | 134.5 ± 16.7 |
| (1.0 / 0.03/b.p.) | (13.3 / 0.44/b.p.) | (6.4 / 0.21/b.p.) | (14.5 / 0.48/b.p.) |
Note: Values in the parentheses correspond to the differences in the deformation energy with respect to naked WT-DNA for the entire region and per b.p.
Abbreviations: ME, methylated; WT, wild type.