TABLE 4.
Correlation and expression analysis of HAT enzymes and prediction of therapeutic axis In GBM.
| E3 ligase | E2 conjugating enzymes | Potential K residue position | Histone acetyltransferases (HATs) enzymes | Therapeutic axis | Loss of acetylation site | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Confidence score >2.5 | CREBBP | EP300 | HAT1 | KAT2A | KAT2B | KAT5 | ||||
| VHL | UBE2E1 | 43 | - | - | - | - | HAT1-UBE2E1(K43)-VHL | No | ||
| UBE2H | 8 | - | - | - | - | - | HAT1-UBE2H(K8)-VHL | Yes | ||
| - | - | - | - | - | HAT1-UBE2H(K52)-VHL | No | ||||
| UBE2J2 | - | - | - | - | - | HAT1-UBE2J2(K64)-VHL | No | |||
| - | - | - | - | HAT1-UBE2J2(K88)-VHL | No | |||||
| GNB2L1 | UBE2C | 18 | - | - | - | - | HAT1-UBE2C(K18)-GNB2L1 | No | ||
| - | - | - | - | - | - | Yes | ||||
| UBE2J2 | - | - | - | - | - | HAT1-UBE2J2(K64)-GNB2L1 | No | |||
| - | - | - | - | HAT1-UBE2J2(K88)-GNB2L1 | No | |||||
| UBE2S | - | - | - | - | - | - | Yes | |||
| - | - | - | - | - | - | Yes | ||||
| - | - | - | HAT1-UBE2S(K211)-GNB2L1 | Yes | ||||||
| - | - | - | - | - | - | Yes | ||||
| - | - | - | - | Yes | ||||||
Lysine residues marked in blue are novel and have not been previously documented in the literature for acetylation modification in GBM, patients.
p-value≤0.05: significant; p-value>0.05; ns: not significant.
√: signifies HAT1 enzymes expression is upregulated, with the significant positive correlation between HAT1 and Ube2E1, Ube2H and Ube2C, Ube2J2, Ube2S.
χ: signifies KAT2A enzyme expression is downregulated, with a not significant association between KAT2A and Ube2E1, Ube2A.
χ: signifies CREBBP, EP300, KAT2B, and KAT5 enzyme expression is not significant, with no significant association between CREBBP, and Ube2S; EP300 and Ube2C; KAT2B and Ube2C, Ube2S; KAT5 and Ube2J2.
The pink rectangle box represents the first proposed therapeutic axis in GBM.
The brown rectangle box represents the second proposed therapeutic axis in GBM.