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. 1999 Feb;73(2):1535–1545. doi: 10.1128/jvi.73.2.1535-1545.1999

TABLE 1.

Restriction sites used to generate pDI-C-derived deletion mutants

Minigenomea Deleted nucleotidesb Enzyme(s) Procedure
M94 8896–9198 HpaI Partial digestion and religation
M90 5829–6539 StuI Religated
M88 8013–8984 NsiI Religated
M80 3281–5050 PstI Religated
M67 2880–5894 XcmI Religated
M64 2880–5894 XcmI, HpaI M67 digested with HpaI and religated
8896–9198
M62 1363–4937 BsmI Filled in with Klenow and religated
M54 3809–8112 NdeI Religated (two sites within the deletion)
M50 2403–7102 AflII Partial digestion and religation
M42 2709–8271 EcoRI Partial digestion and religation
M39 2709–8271 EcoRI, HpaI M42 digested with HpaI and religated
8896–9198
M33 2713–9198 EcoRI + HpaI EcoRI site filled in with T4 DNA pol and ligated with HpaI site
M22 1659–9198 BglII + HpaI See CMV-M22-GUS in Materials and Methods
M21 1349–8986 SphI Religated (two sites within the deletion)
a

The number indicates the approximate size of the minigenome in hundreds of nucleotides. 

b

Numbering according to DI-C (47).