| Experimental models: Organisms/strains |
|
|
Hydra vulgaris (interstitial GCaMP6s transgenic) |
Hydra vulgaris AEP strain |
Dupre and Yuste5
|
|
Hydra vulgaris (Hym-355 GFP transgenic) |
Hydra vulgaris AEP strain |
Yamamoto and Yuste6
|
|
Hydra vulgaris (Hym-355 GCaMP6s transgenic) |
Hydra vulgaris AEP strain |
Yamamoto and Yuste6
|
|
| Recombinant DNA |
|
| pHyVec1 |
Addgene |
Addgene_34789 |
| GCaMP6s Synthetic |
GeneArt |
Custom |
| Hym-355 promotor/terminator |
GENEWIZ |
Custom |
|
| Software and algorithms |
|
| Codes used for the paper |
GitHub |
https://github.com/NTCColumbia |
| Instructions to install DeepLabCut |
GitHub |
https://deeplabcut.github.io/DeepLabCut/docs/installation.html |
|
| Other |
|
| Fluorescent stereo microscope |
Leica |
M165 |
| ORCA-Flash 4.0 LT3 Digital CMOS Camera |
Hamamatsu |
C11440-42U40 |
| Leica EL6000 External light source |
Leica |
EL6000 |
| VWR micro cover glass 22 × 22 mm |
VMR |
48366-067 |
| SecureSeal™ Imaging Spacers |
GRACE BIO-LABS |
SKU: 654002 |
| Two-photon laser-scanning microscope, Ultima In Vivo |
Prairie Technologies/Bruker |
N/A |
| Ti:sapphire laser |
Coherent |
Chameleon Ultra II |
| 50–160-BK Pockels cell |
Conoptics |
302RM |
| Electrically tunable lens |
Optotune AG |
EL-10-30-C-NIR-LD-MV |
| Pulse-amplified laser |
Spectra-physics |
Spirit 1040–8 |
| 1147-4-1064 Pockels cell |
FastPulse Technology |
8025RS-H-2KV |
| Data acquicition system, Multifunction I/O Device |
National Instruments |
USB-6008 |
| USB digital microscope |
Bysameyee |
Microscope-1000× |
| 25× objective |
Olympus |
XLPLN25XWMP2 |
| Autofluorescent plastic slides |
CHROMA |
92001 |
| FB650-40 - Ø1″ Bandpass Filter |
THORLABS |
FB650-40 |
| USB digital microscope |
Bysameyee |
Microscope-1000× |