Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2023 Aug 3;18:68. doi: 10.1186/s40793-023-00524-7

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

PMC Copyright notice

Fig. 4 — Diversity and distribution of biosynthetic gene clusters (BGC) in the rhizosphere microbiome of the fox-resistant common bean cultivar inoculated and non-inoculated with Fusarium oxysporum. (A) Sequence similarity network [constructed with BiG-SCAPE (Navarro-Muñoz et al., 2019), threshold: 0.4] of the different classes of BGCs detected in the rhizosphere microbiome. Taxonomic assignment and BGC class annotation of the nodes are shown. Nodes with fewer than three connections were removed. Node colors represent statistical significance (FDR < 0.05): Yellow nodes are non significant, green and blue nodes are significantly overrepresented in bean plants inoculated and non-inoculated with F. oxysporum. (B) Clustered heat map of the differentially expressed BGCs among the different treatments. (C) Subset of the 9 BGCs that are significantly overexpressed in the resistant cultivar inoculated with the pathogen