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[Preprint]. 2023 Jul 27:2023.07.25.550587. [Version 1] doi: 10.1101/2023.07.25.550587

Table 2.

Quality assessment of short-read RNA assemblers results on GYPC, MAPT, and BIN1 genes. Both Trinity and rnaSPAdes are not able to restore the most of the isoforms.

Gene Number of Simulated Isoforms rnaSPAdes Trinity
GYPC 5 1 3
MAPT 16 2 5
BIN1 15 1 8