Table 2.
Quality assessment of short-read RNA assemblers results on GYPC, MAPT, and BIN1 genes. Both Trinity and rnaSPAdes are not able to restore the most of the isoforms.
| Gene | Number of Simulated Isoforms | rnaSPAdes | Trinity |
|---|---|---|---|
| GYPC | 5 | 1 | 3 |
| MAPT | 16 | 2 | 5 |
| BIN1 | 15 | 1 | 8 |