TABLE 1.
Site-directed mutagenesis of the HIV-1 Vif proteina
Name | Position | Mutation | Relative infectivity | SD |
---|---|---|---|---|
M1 | 5–6 | WQ→AA | 56 | 11 |
M2 | 12–13 | QV→AA | 115 | 17 |
M38 | 16–18 | MRI→AAA | 71 | 16 |
M3 | 22–23 | RL→AA | 86 | 10 |
M20 | 29–31 | MYI→AAV | 41 | 14 |
M4 | 33–34 | RK→AA | 65 | 18 |
M21 | 38–40 | WFY→AAA | 6 | 5 |
M5 | 43–44 | HY→AA | 5 | 1 |
M22 | 53–54 | SE→AA | 61 | 22 |
M6 | 58–59 | PL→AA | 55 | 18 |
M23 | 69–70 | YW→AA | 3 | 3 |
M7 | 73–74 | HT→AA | 116 | 23 |
M24 | 80–81 | HL→AA | 81 | 8 |
M8 | 86–87 | SI→AA | 58 | 7 |
M25 | 90–92 | RKK→AAA | 118 | 55 |
M9 | 97–98 | QV→AA | 73 | 6 |
M26 | 105–107 | QLI→AAV | 2 | 1 |
M10 | 111–112 | YF→AA | 7 | 7 |
M18 | 114 | C→S | 2 | 1 |
M27 | 121–123 | RNT→AAA | 135 | 7 |
M11 | 127–128 | RI→AA | 90 | 21 |
M19 | 133 | C→S | 5 | 1 |
M28 | 135–136 | YQ→AA | 27 | 4 |
M12 | 140–141 | NK→AA | 32 | 6 |
M29 | 144–146 | SLQ→AAA | 7 | 6 |
M13 | 147–148 | YL→AA | 60 | 4 |
M39 | 156–158 | PKQ→AAA | 103 | 51 |
M30 | 157 | K→A | 114 | 23 |
M40 | 158–160 | QIK→AAA | 91 | 17 |
M31 | 160 | K→A | 67 | 7 |
M32 | 161 | P→A | 73 | 16 |
M33 | 162 | P→A | 99 | 36 |
M34 | 163 | L→A | 74 | 4 |
M14 | 161–163 | PPL→AAA | 3 | 1 |
M35 | 164 | P→A | 37 | 20 |
M41 | 161–164 | PPLP→APLA | 12 | 13 |
M36 | 165 | S→A | 33 | 6 |
M37 | 166 | V→A | 80 | 35 |
M15 | 169–170 | LT→AA | 58 | 6 |
M16 | 180–181 | TK→AA | 95 | 11 |
M17 | 189–190 | MW→AA | 96 | 10 |
HIV-1/Δvif | 26–192 | NA | 1 | |
HIV-1 | NA | NA | 100 |
The positions, identities, and nomenclature of the amino acid substitutions that were introduced into the Vif protein of HIV-1HXB3 are listed together with their relative abilities to confer infectivity on a vif-deficient HIV-1. Vif function was determined by cotransfection of H9 cells with pIIIB/Δvif, virus harvest and normalization, and single-cycle infectivity assays using C8166/HIV-CAT indicator cells. The mean infectivity values (and their standard deviations) are set against values of 100 for wild-type Vif and 1 for the negative control (Δvif) following correction for background CAT activity (mock infection). In most cases, the data reflect at least three independent experiments; the exceptions are M24, M27, M39, M30, M41, M36, M16, and M17, which were each tested twice. NA, not applicable.