Skip to main content
. 2023 Jun 8;186(12):2556–2573.e22. doi: 10.1016/j.cell.2023.04.038
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

mouse anti-nc82 antibody DSHB RRID: AB_2314866
chicken anti-GFP antibody Abcam RRID: ab13970
mouse anti-ChAT4B antibody DSHB RRID: AB_528122
rabbit anti-GABA antibody Sigma RRID: A2052
goat Alexa-568 anti-mouse Invitrogen RRID: A21144
goat Alexa-488 anti-chicken Invitrogen RRID: A11038
goat Alexa-647 anti-mouse Invitrogen RRID: A21240
goat Alexa-568 anti-rabbit Invitrogen RRID: A11036

Experimental models: Organisms/strains

Canton-S strain Jefferis lab, originated in Martin Heisenberg lab CSMH
lPN-SS:
w[1118]; GMR54A11-AD; BJD_115F09
gift from Dr Yoshinori Aso SS01189
lvPN-SS:
w[1118]; GMR38D01-AD; GMR59G08-DBD
gift from Dr Mike Dolan LH467
yw, UAS-mCD8-GFP, UAS-mCD8-GFP MRC Laboratory of Molecular Biology N/A
w[1118];20XUAS-opGCaMP6s
su(Hw)attP5;
gift from Yonil Jung,Barrett Pfeiffer, and David Anderson N/A
w[1118];20XUAS-opGCaMP6f
su(Hw)attP5;
gift from Yonil Jung,Barrett Pfeiffer, and David Anderson N/A
w, Or67d-GAL4;; BDSC RRID: BDSC_9998
lPN GAL4
w[1118];; GMR24A10-GAL4
BDSC RRID: BDSC_49059
il3LN6 GAL4
w[1118];; VT046100-GAL4
BDSC RRID: BDSC_75076
W; UAS-Ort; Liu and Wilson33 N/A
VT033066-LexA Cachero et al.72 N/A
w[1118];; GMR53A03-GAL4 BDSC RRID: BDSC_38858 (currently not available)
pC1-SS2: w[1118]; VT002064-p65ADZp in attP2, dsx-DBD Wang et al.34 Janelia FlyLight
SS59911
w[1118], 13XLexAop-IVS-jGCaMP7f su(Hw)attP8;; BDSC RRID: BDSC_80910
w;; dsx-LexA Deutsch et al.73 N/A
w[1118]; 20XUAS-CsChrimson-mVenus; BDSC RRID: BDSC_55135
w[1118], UAS-Hid, UAS-Reaper;; Wang et al.34 N/A
AV2a2-SS:
w[1118]; GMR30A10-AD; GMR53A03-DBD
Dolan et al.35 LH907
aSP-g-SS1:w[1118];; GMR76G09-DBD, JK1029-AD this study N/A
w[1118]; P{y[+t7.7] w[+mC]=20XUAS-IVS-GCaMP6f}attP40 BDSC RRID: BDSC_42747
yw, Or67d-QF;; Riabinina and Potter74 N/A
;QUAS-Kir; gift from Chris Potter N/A
w[1118];; Ir94e-GAL41 Koh et al.45 N/A
w[1118];; Ir94e-GAL42 Sánchez-Alcañiz et al.46 N/A
w[1118]; PBac{y[+t7.7] w[+mC]=20XUAS-IVS-jGCaMP7f}VK00005 BDSC RRID: BDSC_79031
w[1118]; GMR81A04-LexA; BDSC RRID: BDSC_54390
aSP-g-SS1:
w[1118];;GMR76G09-DBD,JK1029
this study N/A
aSP-g-SS1/aSP-g-SS2:
w[1118];;GMR76G09-DBD,JK1029/GMR81A04-DBD,JK1029
this study N/A
JK1029, empty-DBD:
w[1118]; JK1029,GAL4-DBD.empty control (BPZpGDBD)
this study N/A
w[1118];; fruFLP Von Philipsborn et al.75 N/A
w[1118];;20XUAS> myrTopHat2 > GCaMP6f
su(Hw)attP1
gift from Yonil Jung,Barrett Pfeiffer, and David Anderson N/A
aSP-g-FLP1:
w[1118];; 76G09-GAL4, fruFLP
this study N/A
aSP-g-FLP2:
w[1118];; 81A04-GAL4, fruFLP
this study N/A
empty-GAL4 FLP:
w[1118];; empty-GAL4 (pBDPGAL4Uw), fruFLP
this study N/A
w;; UAS>mCherry>eGFP:Kir2.1 Watanabe et al.76 N/A
aSP-g LexA FLP:
w[1118];; 81A04-LexA, fruFLP
this study N/A
13xLexAop>dsFRT>CsChrimson:mVenus;; Gift from Yoshinori Aso N/A
w;; 20xUAS>dsFRT>CsChrimson:mVenus Takayanagi-Kiya and Kiya77 N/A
w;; pJFRC-10xUAS-IVS-eGFP-Kir2.1; Janelia Research Campus N/A

Software and algorithms

R Open source RRID:SCR_001905
natverse (R package) Open source, Bates et al.78 https://github.com/natverse
MATLAB MathWorks RRID:SCR_001622
ScanImage 2020 Vidrio Technologies RRID:SCR_014307
Python Open source RRID:SCR_008394
CATMAID Open source,
Saalfeld et al.79
RRID:SCR_006278
Fiji Open source RRID:SCR_002285
Bonsai Open source RRID:SCR_017218
DeepLabCut Open source, Mathis et al.27 https://deeplabcut.github.io/DeepLabCut
FicTrac Open source, Moore et al.80 https://github.com/rjdmoore/fictrac

Deposited data

Custom code for connectomics analyses this study https://github.com/jefferislab/2023_cVA_Taisz_Galili
https://doi.org/10.5281/zenodo.7853021
Image stack from EM neurons for MIP search this study https://github.com/jefferislab/skeleton-to-MIP
https://doi.org/10.5281/zenodo.78530219