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. 2022 Dec 5;10(6):2443–2456. doi: 10.1016/j.gendis.2022.10.030

Table 2.

Epigenetics-based strategy for MSC aging and age-related diseases.

Histone modification Drugs or regulator Histone modifier Mechanism Therapeutic effect Reference
Up-regulation of the decreased levels of histone methylation Twist-1 EZH2 Increase H3K27me3 along the Ink4A/Arf locus, repress transcription of both P16/P14 Reduce the ratio of senescent cells and continued to proliferate 43
1,25(OH)2D3 EZH2 Up-regulate Ezh2 via the vitamin D receptor (VDR)-mediated transcription to increase H3K27me3. Prevent bone loss 74
1,25(OH)2D3 unknown Up-regulate H3K9me2 and down-regulate H3ac at the BMP2 promoter region and activated the Wnt/β-catenin signaling. Prevent bone loss 75
Lentivirus transduction ASH1L Regulate the enrichment of H3K4me3 at the Hoxa10, Osx, Runx2, and Sox9 promoters Facilitate osteogenesis and chondrogenesis, suppress adipogenesis 54
LBP SETD2 This leads to a decrease of H3K36me3 in the Lbp gene body Rescue the lack of osteogenesis and enhanced adipogenesis 56
siRNA Transfection CARM1 Bind to the promoter region of DDR2 and methylated H3R17 Senescence cells were decreased 58
BMP2 KDM5A Increase the H3K4me3 level at the Runx2 promoter Rescue bone loss and the decrease in bone formation 51
Pargyline LSD1 Enhance the dimethylation level of H3K4 at the promoter regions of Runx2 and Bglap genes Rescue or prevent the osteoporotic 77
Down-regulation of the increased levels of histone methylation Retroviral transduction KDM6A Remove H3K27me3 at the Runx2 and osteocalcin TSS. Promote bone formation 46
BMP-4/7 KDM4B
KDM6B
Promote DLX expression by demethylating H3K9me3.
Control HOX gene expression by demethylating H3K27me3.
Promote bone regeneration and repair 41
DZNep EZH2 Reduce EZH2 expression, decreased H3K27me3 levels on promoters of Wnt1, Wnt6, and Wnt10a Increase trabecular bone, enhance osteogenic differentiation, and inhibit adipogenesis 42
DZNep EZH2 Reduce EZH2 expression, decrease H3K27me3 at the Runx2 and Bglap TSS Increase mineral deposit 46
Chaetocin SUV39 family Suppress H3K9 methylation via Wnt/β-catenin signaling pathways Increase in bone tissue 78
Up-regulation of the decreased levels of histone acetylation Lentivirus transduction GCN5 Increasing H3K9ac on the promoters of Wnt genes Attenuate bone loss during osteoporosis 65
Retroviral infection PCAF Control BMP signaling gene expression by increasing H3K9ac. Inhibit adipocyte 67
AA PcG KMD6B Repress KDM6B expression and sustain PcG expression Downregulate P16INK4A expression levels 60
VPA HDAC8 Promote the level of H3K9ac and enhance the expression of osteogenesis-related genes Accelerate the osteogenic mineralization 79
HDAC9 inhibitors HDAC9 Maintains the levels of acetylation modifications on H3K9 of autophagy-related genes Promote osteogenic differentiation and repress adipogenic 62
bFGF unknown Regulate H3K9ac and H3K14ac at TERT, OCT4, SOX2, RUNX2, and ALP promoter regions Promote MSC proliferation 68
Down-regulation of the increased levels of histone acetylation Lentiviral transduction SIRT6 Deacetylate H3K56 at the HO-1 promoter. Delayed cellular senescence 70
GSK343 HDAC9c Regulate the EZH2-HDAC9c regulatory axis, sequester PPARγ-2 and allow RUNX2 to turn on OPN transcription. Enhance osteogenesis and suppress adipogenesis 72