TABLE 5.
Sites of concerted integration of ASV into acceptor DNA stimulated by HMG-I(Y)
Sequence of donor-acceptor junctiona | Size (bp) of duplication of plasmid DNA | Plasmid position of integration |
---|---|---|
ctttTGTAG...CTTCActtt | 4 | 536–539 |
taagtTGTAG...CTTCAtaagt | 5 | 1373–1377 |
cgcctcTGTAG...CTTCAcgcctc | 6 | 842–847 |
gtttgccTGTAG...CTTCAgttgcc | 7 | 1552–1558 |
catgtTGTAG...CTTCAcatgt | 5 | 981–985 |
cagcggTGTAG...CTTCAcagcgg | 6 | 1565–1570 |
gtggtgTGTAG...CTTCAgtggtg | 6 | 1452–1457 |
cgtgtcTGTAG...CTTCAcgtgtc | 6 | 1367–1372 |
Deoxynucleotide sequence junction of the donor DNA integrated into the acceptor DNA. The sequence of only one strand of the duplex is shown. Lowercase letters denote acceptor DNA; uppercase letters indicate the processed viral DNA sequences, which have lost 2 bp from each end.