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. 2023 Aug 7;8(8):841–846. doi: 10.1080/23802359.2023.2241684

Table 1.

Potential regions to design PCR primers for the discrimination of Albizia odoratissima (KX852437), A. bracteata (MN709837) and A. kalkora (MW420923).

No. Species Forward region
start-end
Inverse region
start-end
Location of DNA barcodes Forward sequences Inverse sequences
1 A. odoratissima 11122–11177 11227–11276 atpA AAAACATTAAATGAGATTTTTAATCAATTTTTTTCTACTTGTTCCTGAAGTAAAAA AAAACATTAAATGAGATTTTTAATCAATTTTTTTCTACTT  GTTCCTGAAGTAAAAA
A. bracteata 12134–12189 12239–12288
A. kalkora 12056–12111 12161–12210
2 A. odoratissima 12004–12038 12082–12134 atpA ACTACAATAGTGTATTCCATTGCTCCCCTTTCTTG ACTACAATAGTGTATTCCATTGCTCCCCTTTCTTG
A. bracteata 13016–13050 13094–13146
A. kalkora 12938–12972 13016–13068
3 A. odoratissima 14953–15088 15141–15197 atpH-atpI CCGACGGCCAACCCAGCAGCAATAACCGAAGCGGCAGAAATCAGTGGATTCATG  ATAAGTTCCTCGCACCAAAAATAAAGAAATAGTTAATGATAC  AATCAACCAACAAATTATGACTTAATTATTCCATCATTAA CCGACGGCCAACCCAGCAGCAATAACCGAAGCGGCAGAAATCAGT  GGATTCATGATAAGTTCCTCGCACCAAAAATAAAGAAATAGTTAA  TGATACAATCAACCAACAAATTATGACTTAATTATTCCATCATTAA
A. bracteata 16000–16135 16186–16242
A. kalkora 15867–16002 16052–16108
4 A. odoratissima 16903–17138 17203–17260 atpI-rps2 GAACAGCTATAATGGCTGAAACTAATAAAATAGCAATTACAACCCAAGAAGTAA  TAAGTACTTGGGCATGGACTTGGAAACCCCCTATTTGCCAATAGAAATGTTGG  CCTACTTCCACAGCCGATATATCGTATAATCTTTTTAATGTGTTGATGGAACATAAT  AGAACATTCATATTGCCCTCTGAAAGAAATACAACTTTAAAAGGAATTATTTTGA  TTCAACCATCTCTTTTT GAACAGCTATAATGGCTGAAACTAATAAAATAGCAATTACAACCC  AAGAAGTAATAAGTACTTGGGCATGGACTTGGAAACCCCCTATTT  GCCAATAGAAATGTTGGCCTACTTCCACAGCCGATATATCGTATAATC  TTTTTAATGTGTTGATGGAACATAATAGAACATTCATATTGCCCTCT  GAAAGAAATACAACTTTAAAAGGAATTATTTTGATTCAACCATCTCTTTTT
A. bracteata 18162–18397 18470–18527
A. kalkora 17979–18214 18287–18344
5 A. odoratissima 17203–17260 17312–17609 atpI-rps2 and rps2 TTTTTTGCGCGATTCAGTAATAGTATAGTAACCGATTCCATAAATCTATGGAGTTCCC TTTTTTGCGCGATTCAGTAATAGTATAGTAACCGATTCCATAAATC  TATGGAGTTCCC
A. bracteata 18470–18527 18585–18882
A. kalkora 18287–18344 18396–18693
6 A. odoratissima 18053–18078 18123–18225 rps2-rpoC2 GATCAGGTATCCTGAAATAGAAATAA GATCAGGTATCCTGAAATAGAAATAA
A. bracteata 19323–19348 19393–19490
A. kalkora 19135–19160 19205–19302
7 A. odoratissima 29593–29618 29664–29713 rpoB-trnC-GCA AATACTGATTAGTTATGTCTCAATTT AATACTGATTAGTTATGTCTCAATTT
A. bracteata 30855–30880 30926–30975
A. kalkora 30674–30699 30749–30798
8 A. odoratissima 29664–29713 29782–29830 rpoB-trnC-GCA ATTGAAGAATCATTCATGAATAGTTAATGGTTCCGATTTGTCCTGAATTT ATTGAAGAATCATTCATGAATAGTTAATGGTTCCGATTTGTCCTGAATTT
A. bracteata 30926–30975 31042–31090
A. kalkora 30749–30798 30866–30914
9 A. odoratissima 52029–52062 52137–52211 intron of trnL-UAA ATCGAAACTCCAGAAAAGAAAGGATCAAGGATGA ATCGAAACTCCAGAAAAGAAAGGATCAAGGATGA
A. bracteata 52899–52932 53003–53077
A. kalkora 52790–52823 52898–52972
10 A. odoratissima 5103–5133 5205–5326 matK-rps16 AAAAGAAATAAAGAAAGAAAAGAAGTTCTTT AAAAGAAATAAAGAAAGAAAAGAAGTTCTTT
A. bracteata 5135–5165 5242–5363
A. kalkora 5137–5167 5234–5355

Note: The regions were sorted by the K-2p distance of the DNA barcodes between each pair of regions.