Table 3:
Reagents details
Antibodies used for immunocytochemistry/flow-cytometry | |||
---|---|---|---|
Antibody | Dilution | Company Cat # and RRID | |
Pluripotency Markers | Mouse anti-SOX2 | 1:200 | Millipore, Cat# MAB4423, RRID:AB_11213224 |
Pluripotency Markers | PE anti-human SSEA-4 | 1:200 | BioLegend Cat# 330406, RRID:AB_1089206 |
Pluripotency Markers | Mouse anti-OCT3/4 | 1:200 | Santa Cruz Biotechnology Cat# sc5279, RRID: AB_628051 |
Pluripotency Markers | Rabbit anti-OCT4 | 1:200 | Abcam Cat #ab19557, RRID:N/A |
Pluripotency Markers | Mouse anti-Nanog | 1:200 | Millipore Cat# MABD24, RRID:AB_11203826 |
Differentiation Markers | Goat anti-SOX17 | 1:200 | R and D Systems Cat# AF1924, RRID:AB_355060 |
Differentiation Markers | Goat anti-Brachyury | 1:200 | R and D Systems Cat# AF2085, RRID:AB_2200235 |
Differentiation Markers | Chicken anti-beta-III Tubulin | 1:200 | Novus Cat# NB100–1672, RRID:AB_522025 |
Secondary antibodies | Donkey anti-mouse Alexa Fluor 488 | 1:500 | Thermo Fisher Scientific Cat# A21202, RRID:AB_141607 |
Secondary antibodies | Donkey anti-mouse Alexa Fluor 568 | 1:500 | Thermo Fisher Scientific Cat# A10037, RRID:AB_2534013 |
Secondary antibodies | Donkey anti-rabbit Alexa Fluor 568 | 1:500 | Thermo Fisher Scientific Cat# A10042, RRID:AB_2534017 |
Secondary antibodies | Donkey anti-goat Alexa Fluor 488 | 1:500 | Thermo Fisher Scientific Cat# A11055, RRID:AB_2534102 |
Secondary antibodies | Goat anti-chicken Alexa Fluor 568 | 1:500 | Thermo Fisher Scientific Cat# A11041, RRID:AB_2534098 |
Primers | |||
Target | Forward/Reverse primer (5′−3′) | ||
Targeted variant analysis/sequencing | A53T | CTAGCTAATCAGCAATTTAAGGCTA/GCTC AGTGATTGTTTTACAATTTCA | |
CRISPR reagents | |||
Targeted mutation | crRNA used for Cas9 editing | Donor oligo sequence | |
A53T | GTGGTGCATGGTGTGACAAC agg | AAAACTAGCTAATCAGCAATTTAAGGCTAGCTT GAGACTTATGTCTTGAATTTGTTTTTGTAGGCT CCAAAACCAAGGAGGGAGTGGTGCATGGTGT GGCAACAGGTAAGCTCCATTGTGCTTATATCC |
|
AAAGATGATATTTAAAGTATCTAGTGATTAGTG TGGCCCAGTATTCAAGATTCCTATGAAATTGTAAAAC |