Table 1.
Top 20 metabolic pathways in PICRUSt2 prediction of twig sample
| Category | Pathway | |
|---|---|---|
| Biosynthesis | Fatty acid and lipid biosynthesis | Cis-vaccenate biosynthesis |
| Gondoate biosynthesis (anaerobic) | ||
| Fatty acid elongation -- saturated | ||
| Mycolate biosynthesis | ||
| Oleate biosynthesis IV (anaerobic) | ||
| Palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) | ||
| Stearate biosynthesis II (bacteria and plants) | ||
| (5Z)-dodec-5-enoate biosynthesis | ||
| CDP-diacylglycerol biosynthesis I | ||
| CDP-diacylglycerol biosynthesis II | ||
| Amino acid biosynthesis | L-isoleucine biosynthesis II | |
| L-isoleucine biosynthesis I (from threonine) | ||
| L-valine biosynthesis | ||
| Superpathway of branched amino acid biosynthesis | ||
| Carbohydrates biosynthesis | GDP-mannose biosynthesis | |
| Secondary metabolites biosynthesis | Pyruvate fermentation to isobutanol (engineered) | |
| Generation of precursor metabolites and energy | TCA cycle | TCA cycle VI (obligate autotrophs) |
| TCA cycle I (prokaryotic) | ||
| Electron transfer | Aerobic respiration I (cytochrome c) | |
| Superpathway | Superpathway of sulfate assimilation and cysteine biosynthesis | |
PICRUSt2, Phylogenetic Investigation of Communities by Reconstruction of Unobserved States 2; TCA, tricarboxylic acid.