Table 2.
Top 20 metabolic pathways in PICRUSt2 prediction of leaves sample
| Category | Pathway | |
|---|---|---|
| Biosynthesis | Fatty acid and lipid biosynthesis | Cis-vaccenate biosynthesis |
| Gondoate biosynthesis (anaerobic) | ||
| Mycolate biosynthesis | ||
| Fatty acid elongation -- saturated | ||
| Fatty acid salvage | ||
| Oleate biosynthesis IV (anaerobic) | ||
| Stearate biosynthesis II (bacteria and plants) | ||
| Palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) | ||
| CDP-diacylglycerol biosynthesis I | ||
| CDP-diacylglycerol biosynthesis II | ||
| (5Z)-dodec-5-enoate biosynthesis | ||
| Amino acid biosynthesis | L-isoleucine biosynthesis II | |
| Superpathway of L-serine and glycine biosynthesis I | ||
| L-isoleucine biosynthesis I (from threonine) | ||
| L-valine biosynthesis | ||
| L-ornithine biosynthesis | ||
| Carbohydrates biosynthesis | GDP-mannose biosynthesis | |
| Secondary metabolites biosynthesis | Pyruvate fermentation to isobutanol (engineered) | |
| Degradation/Utilization/Assimilation | Fatty acid and lipid degradation | Fatty acid β-oxidation I |
| Generation of precursor metabolites and energy | Electron transfer | Aerobic respiration I (cytochrome c) |
PICRUSt2, Phylogenetic Investigation of Communities by Reconstruction of Unobserved States 2.