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Significant gene expression counts per cell type across compartments.
| Cell type | Both compartments | TA only | WB only |
|---|---|---|---|
|
| |||
| CD4 T | 1 | 0 | 177 |
| CD8 T | 1 | 4 | 38 |
| Monocytes | 8 | 13 | 176 |
| Neutrophils | 14 | 9 | 92 |
| NK | 0 | 11 | 19 |
| other | 0 | 0 | 37 |
| Tregs | 3 | 84 | 50 |
Number of significantly different genes per cell type using MAST (adj. p-value < 0.1 & |log2FC| > 0.25).
TA = tracheal aspirate. WB = whole blood. Both compartments = both WB and ETA samples.
