Table-4.
Amino acid variation of VP1 gene 166–412 of IBD virus in the study compared to VP1 gene sequence available in GenBank.
| No. | Accession No./Strain/Genotype | Amino acid substitution at position VP1 gene | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| |||||||||||||||
| 166 | 167 | 242 | 287 | 360 | 390 | 393 | 399 | 401 | 402 | 403 | 404 | 410 | 412 | ||
| 1 | AF083092/Winterfield vaccine/B1 | S | G | D | T | P | L | E | V | A | D | N | I | N | W |
| 2 | AY918947/Lukert vaccine/B1 | ||||||||||||||
| 3 | HG974566/France. Classic strain/B1 | ||||||||||||||
| 4 | KU578105/India/B1 | M | D | ||||||||||||
| 5 | MT505348/Malaysia. Non-very virulent/B1 | ||||||||||||||
| 6 | JX134484/China. Novel variant strain/B1 | ||||||||||||||
| 7 | MZ066615/China. Novel variant strain/B1 | ||||||||||||||
| 8 | AY368654/USA. Variant strain/B1 | ||||||||||||||
| 9 | AY459321/USA. Variant strain/B1 | ||||||||||||||
| 10 | AF133905/USA. Variant strain/B1 | ||||||||||||||
| 11 | AY103464/China. Attenuated strain/B1 | ||||||||||||||
| 12 | DQ403249/China. Attenuated strain/B1 | ||||||||||||||
| 13 | AF362775/Germany. Attenuated strain/B1 | ||||||||||||||
| 14 | GQ166971/China. Very virulent strain/B2 | E | A | . | M | D | |||||||||
| 15 | FJ695139/China. Very virulent strain/B2 | E | A | S | M | D | |||||||||
| 16 | KF569804/China. Very virulent strain/B2 | E | A | . | M | D | |||||||||
| 17 | D49707/Japan. Very virulent strain/B2 | E | A | . | M | V | |||||||||
| 18 | MT505345/Malaysia. Very virulent strain/B2 | E | A | M | D | ||||||||||
| 19 | MT505344/Malaysia. Very virulent strain/B2 | E | A | M | D | ||||||||||
| 20 | MT505347/Malaysia. Very virulent strain/B2 | E | A | M | D | ||||||||||
| 21 | MT505346/Malaysia. Very virulent strain/B2 | E | A | M | D | ||||||||||
| 22 | AY705393/China. Very virulent strain/B3 | . | . | A | |||||||||||
| 23 | MK472712/China. Very virulent strain/B3 | A | |||||||||||||
| 24 | FJ040159/China. Very virulent strain/B3 | A | |||||||||||||
| 25 | EF517529/China. Very virulent strain/B3 | A | |||||||||||||
| 26 | KX759554/Poland. Very virulent strain/B4 | A | . | M | |||||||||||
| 27 | OQ688920/Broiler/Indonesia/Sragen/A-E1070322 | R | W | E | A | S | M | D | |||||||
| 28 | OQ688921/Broiler/Indonesia/Sragen/A-E1290422 | . | . | E | A | . | M | D | |||||||
| 29 | OQ688922/Broiler/Indonesia/Batang/B-01141221 | . | . | E | A | . | M | D | |||||||
| 30 | OQ688923/Broiler/Indonesia/Sleman/C-A1201221 | . | . | E | A | S | M | D | |||||||
| 31 | OQ688924/Broiler/Indonesia/Wonogiri/D-11120122 | R | W | E | A | . | M | D | T | . | |||||
| 32 | OQ688925/Broiler/Indonesia/Wonogiri/D-61290122 | E | . | E | A | . | M | D | T | . | |||||
| 33 | OQ688926/Broiler/Indonesia/Wonogiri/D-42100222 | . | . | E | A | . | M | D | L | ||||||
| 34 | OQ688927/Broiler/Indonesia/Wonogiri/D-71160222 | E | E | A | M | D | . | ||||||||
| 35 | OQ688928/Broiler/Indonesia/Wonogiri/D-72160222 | E | A | M | D | Y | L | ||||||||
| 36 | OQ688929/Broiler/Indonesia/Wonogiri/D-52250222 | E | A | M | D | ||||||||||
| 37 | OQ688930/Broiler/Indonesia/Wonogiri/D-62230322 | R | W | E | A | M | D | . | . | T | . | ||||
| 38 | OQ688931/Broiler/Indonesia/Wonogiri/D-102120322 | K | . | E | A | M | D | . | . | T | . | ||||
| 39 | OQ688932/Broiler/Indonesia/Wonogiri/D-12110422 | E | . | E | A | M | D | . | . | . | . | . | T | . | |
| 40 | OQ688933/Broiler/Indonesia/Wonogiri/D-43220422 | . | . | E | A | M | D | . | V | H | I | L | . | . | |
| 41 | OQ688934/Broiler/Indonesia/Wonogiri/D-71190422 | E | A | M | D | . | . | . | . | . | . | . | |||
| 42 | OQ688935/Broiler/Indonesia/Wonogiri/D-51200422 | E | A | M | D | T | |||||||||
| 43 | OQ688936/Broiler/Indonesia/Wonogiri/D-11100422 | E | A | S | M | D | C | ||||||||
| 44 | OQ688937/Broiler/Indonesia/Wonogiri/D-33310322 | K | E | A | M | D | T | ||||||||
| 45 | OQ688938/Broiler/Indonesia/Wonogiri/D-101000022 | E | A | M | D | ||||||||||
| 46 | OQ688939/Broiler/Indonesia/Wonogiri/D-61000022 | E | A | S | M | D | T | ||||||||
| 47 | OQ688940/Broiler/Indonesia/Wonogiri/D-63000022 | E | A | M | D | T | |||||||||
| 48 | OQ688941/Broiler/Indonesia/Wonogiri/D-13020622 | E | E | A | M | D | T | ||||||||