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. 2023 Aug 15;14:4935. doi: 10.1038/s41467-023-40426-3

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 6 — a The top 10, 25, L/5, and L precisions of DeepTMP for the targets with alpha, beta, and alpha+beta topologies. b The top 10, 25, L/5, and L precisions of DeepTMPα that is trained on alpha transmembrane proteins only, for the targets with alpha, beta, and alpha+beta topologies. c The average entropies of the targets for three types of topologies including n = 38 alpha, 3 beta, and 11 alpha+beta cases. The vertical bars represent the mean, and the lines are error bars (standard deviations). The outliers are plotted as circle. d The top 10, 25, L/5, and L precisions of DeepTMP for extracellular (Extra), transmembrane (TM), and cytoplasmic (Cyto) regions of transmembrane protein.