TABLE 2.
Average pairwise distance values between dUTPases from various groups of organisms
Taxon | Avg pairwise distancea (SD) of:
|
||||||
---|---|---|---|---|---|---|---|
HSAPb [1] | ORFV [1] | Poxvirusc [5] | AVAD [1] | PBCV [1] | Eubacteriad [15] | Archaeae [2] | |
HSAP [1] | 0.00 (0.00) | ||||||
Rodentsf [2] | 4.53 (0.68) | ||||||
Mammalsg [3] | 34.50 (0.68) | 37.63 (5.68) | 34.48 (1.62) | 58.99 (1.55) | 101.95 (11.52) | 194.22 (33.27) | |
Eukaryotesh [6] | 46.65 (6.91) | 59.14 (7.93) | 67.74 (5.30) | 54.86 (6.21) | 56.47 (9.04) | 97.98 (10.62) | 196.66 (24.60) |
Distance values were calculated as described in Materials and Methods and used to produce the phylogeny reported in Fig. 4. The number of organisms is given in brackets. dUTPase abbreviations are as defined in the text. Standard deviations are in parentheses.
Human dUTPase (HSAP) is provided as a reference point for comparison with dUTPases from rodents and nonmammalian eukaryotes.
Poxvirus dUTPases excluding that of ORF virus (VACW, VARI, CPOX, VACL, and SPOX).
All 15 eubacterial sequences as listed in Table 1.
Archaeal dUTPases (MJAN and DAMB).
Rodent dUTPases (MMUS and RNOR).
Mammalian dUTPases (HSAP, MMUS, and RNOR).
Eukaryote dUTPases excluding those of mammals (CELEA, CELEM, CELEC, LESC, CALB, and SCER).