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. 2023 Jun 27;17(9):1455–1466. doi: 10.1038/s41396-023-01460-7

Table 2.

Comparison of the relative abundance of dfrB gene variants (copies per 16 S rRNA gene copies) in WWTP effluents and river samples.

Gene variant Wastewater samples River samples Higher in adj. p value Signif. code Confirmed by split sampling in
dfrB1 3.7e−05 1.8e−06 Wastewater 1.9e−17 *** 2/2 subsets
dfrB2 3.9e−06 1.2e−06 Wastewater 6.3e−04 *** 2/2 subsets
dfrB3 6.6e−05 5.9e−06 Wastewater 1.5e−05 *** 2/2 subsets
dfrB4 1.9e−05 4.7e−06 Wastewater 2.4e−07 *** 2/2 subsets
dfrB5 1.6e−06 0e+00 Wastewater 0.0064 ** 1/2 subsets
dfrB7 4.7e−06 0e+00 Wastewater 8.8e−06 *** 2/2 subsets
dfrB9 0e+00 4.6e−05 River samples 3.5e−06 *** 2/2 subsets
dfrB10 2.4e−06 2e−04 River samples 1.3e−17 *** 2/2 subsets
dfrB13 0e+00 2.2e−05 River samples 0.0011 ** 1/2 subsets
dfrB14 3.5e−06 1.7e−05 River samples 0.26 n.s.
dfrB15 7.8e−07 2.3e−06 River samples 1 n.s.
dfrB16 3.9e−07 1.2e−06 River samples 0.65 n.s.
dfrB17 0e+00 1.2e−06 River samples 0.44 n.s.
dfrB19 0e+00 3.5e−06 River samples 0.14 n.s.
dfrB20 0e+00 5.9e−07 River samples 0.57 n.s.
dfrB21 0e+00 5.9e−07 River samples 0.57 n.s.

Reported p values refer to a Wilcoxon rank sum test with the null hypothesis being that the relative abundances of dfrB gene variants are equal in both groups. Each variant was considered a distinct hypothesis and p values were adjusted accordingly (***: p < 0.001, **: p < 0.01, n.s.: not significant). The rightmost column indicates whether the significance of contrasts (adj. p value  <  0.05) could be verified on independent data subsets, each representing 50% of the bacterial DNA from wastewater and river samples, respectively.