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. 2023 Jul 27;26(9):107481. doi: 10.1016/j.isci.2023.107481

Figure 4.

Figure 4

Heterozygosity and Runs of Homozygosity for the high-coverage individuals plus the Arabian leopards

(A) Genome-wide heterozygosity for all samples with coverage levels higher than 15x and the two Arabian leopards. In dark, genome-wide heterozygosity for downsampled individuals, in light heterozygosity with non-downsampled individuals. Arabian leopards were not downsampled. Statistically significant differences exist between downsampled African and Arabian leopards (p value <0.01) but not between downsampled Asian and Arabian (p value = 0.57).

(B) Percentage of the genome in ROH. Different colors within the columns indicate the relative percentage of long (>1 Mbp), medium (>500 Kbp and <1 Mbp) and short (<500 Kbp) ROHs along the genome for the high-coverage samples and the two Arabian leopards; see Table S2 for more detailed information. Abbreviations are as follows: PAR, P. p. pardus; NIM, P. p. nimr; FUS, P. p. fusca; MEL, P. p. melas and ORI, P. p. orientalis.