TABLE 1.
Direct repeat sequences and terminal direct repeat sequences of the CRISPR1 locus according to clonal complexes
| Type | Repeat sequence (5′–3′) | Clonal complex(es) or ST |
|---|---|---|
| Direct repeats | ||
| Typical repeat | GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC | CC1, CC10, CC17, CC19, CC23 |
| Repeat variant | GTTTTAGAGCTGTGCTGTTTCAAATGGTTTCAAAAC | CC1, CC10, CC17, CC19, CC23 |
| GTTTTAGACCTGTGCTGTTTCGAATGGTTCCAAAAC | CC1, CC10, CC17, CC19, CC23 | |
| GTTTTAGTGCTGTGCTGTTTCGAATGGTTCCAAAAC | CC17 | |
| GTTTTAGAGCTGTGCTATTTCGAATGGTTCCAAAAC | CC23 | |
| GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC | CC23 | |
| GTTTTAAAGCTGTGCTGTTTCGAATGGTTCCAAAAC | CC19 | |
| GTTTTAGAGCTGTGCTGTTTCGAATGATTCCAAAAC | CC22 | |
| Terminal repeats | ||
| Typical terminal repeat | GTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA | CC1, CC10, CC19 |
| Terminal repeat variants | GTTTTAAAGCTGTGCTGTTATTATGCTAGGGCACCA | CC23 |
| GTTTTAGAGCTGTGCGGTTATTATGCTAGGGCACCG | CC17 | |
| GTTTTAGAGCTGTGCGGTTATTATGCTAGGGCATCA | CC1, CC10, CC19 | |
| GTTTTAGAGCTGCGCGGTTATTATGCTAGGGCATCA | CC10 (A909) | |
| GTTTTAGAGCTGTGCTGTTATTATGCTAGGGCACCA | CC388 | |
| GTTTTAGAGCTGCGCGGTTATTATGCTATGCTAGGA | CC22 |