TABLE 1.
Features of the chromosome-level genome of A. flagrans CBS 565.50
| Sequencing feature | Valuea |
|---|---|
| Genome size (Mb) | 35.85 |
| Chromosomes | 6 |
| Clean data (Gb) | 8.91 |
| Depth (×) | 109.58 |
| Mapped (%) | 99.07 |
| Coverage (%) | 99.96 |
| Lachesis groups | 7 |
| N50 read length (bp) | 6,108,558 |
| Max contig length (bp) | 8,301,709 |
| N90 length of scaffolds (bp) | 4,110,191 |
| % ≥ Q30 | 92.84 |
| %G+C | 45.57 |
| Repeat content (%) | 5.16 |
| tRNA genes | 177 |
| rRNA genes | 98 |
| Total length of coding sequences (bp) | 17,009,220 |
| Avg gene size (bp) | 1,701.43 |
| Avg no. of exons/gene | 3.61 |
| Avg no. of introns/gene | 2.61 |
| Avg CDS size (codons) | 403.46 |
| Avg intron length (bp) | 94.06 |
| Protein-encoding genes | 9,997 |
| Gene clusters | 11 |
| No. (%) of secretomes | 733 (~7.33) |
| Transmembrane proteins | 1,805 |
| Effector proteins | 133 |
a
Values are the numbers of the indicated feature unless otherwise specified.