Key resources table.
| Reagent type (species) or resource | Designation | Source or reference | Identifiers | Additional information |
|---|---|---|---|---|
| Gene (Guillardia theta) |
GtCCR4 | Yamauchi et al., 2017 | GenBank: MF039475.1 | |
| Gene (Klebsormidium nitens) |
KnChR | Tashiro et al., 2021 | GenBank: DF236986.1, GAQ79757.1 | |
| Gene (Chlamydomonas reinhardtii) |
CrChR2[T159C] | Berndt et al., 2011 | ||
| Gene (Chloromonas oogama) |
CoChR | Klapoetke et al., 2014 | ||
| Gene (Chlamydomonas noctigama) |
ChrimsonR | Klapoetke et al., 2014 | ||
| Gene (Blastocladiella emersonii) |
BeGC1 | Scheib et al., 2015 | GenBank: KP731361.1 | |
| Gene (G. theta) |
GtACR1 | Govorunova et al., 2015 | GenBank: KP171708.1 | |
| Gene (Beggiatoa sp.) |
bPAC | Stierl et al., 2011 | GenBank: GU461306.2 | |
| Gene (Oscillatoria acuminata) |
OaPAC | Ohki et al., 2016 | GenPept: WP_015149803.1 | |
| Genetic reagent (Danio rerio) | mitfaw2/w2 | Lister et al., 1999 | ||
| Genetic reagent (D. rerio) | TgBAC(vsx2:GAL4FF) | Kimura et al., 2013 | TgBAC(vsx2:GAL4FF) nns18Tg | |
| Genetic reagent (D. rerio) | Tg(myl7:GAL4FF) | Accompanying paper | Tg(myl7:GAL4FF)nub38Tg | Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:GtCCR4-3.0-EYFP) | This paper |
Tg(5xUAS-hsp70l:GtCCR4- 3.0-EYFP, myl7:mCherry)nub49Tg |
Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS:CoChR-tdTomato) | This paper | Tg(14xUAS-E1b:CoChR-tdTomato)nub120Tg | Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:ChrimsonR-tdTomato) | This paper | Tg(5xUAS-hsp70l:ChrimsonR, myl7:mCherry)nub119Tg | Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:GtCCR4-MT-P2A-TagCFP) | This paper |
Tg(5xUAS-hsp70l:GtCCR4- MT-P2A-TagCFP, myl7:mCherry)nub50Tg |
Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:KnChR-3.0-EYFP) | This paper | Tg(5xUAS-hsp70l:KnChR-3.0-EYFP, myl7:mCherry)nub51Tg | Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:CrChR2[T159C]-mCherry) | This paper |
Tg(5xUAS-hsp70l:CrChR2 [T159C]-mCherry, myl7:mCherry)nub52Tg |
Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:GtACR1-EYFP) | This paper |
Tg(5xUAS-hsp70l:GtACR1- EYFP, myl7:mCherry)nub53Tg |
Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS:CoChR-tdTomato) | This paper | Tg(14xUAS-E1b:CoChR-tdTomato)nub120Tg | Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:ChrimsonR-tdTomato) | This paper | Tg(5xUAS-hsp70l:ChrimsonR-tdTomato)nub119Tg | Available from M. Hibi Lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:BeGC1-EGFP) | This paper | Tg(5xUAS-hsp70l:BeGC1-EGFP, myl7:mCherry)nub54Tg | Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:bPAC-MT-T2A-tDimer) | This paper | Tg(5xUAS-hsp70l:bPAC-MT-T2A-tDimer, myl7:mCherry)nub55Tg | Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:OaPAC-Flag-P2A-TagCFP) | This paper |
Tg(5xUAS-hsp70l: OaPAC-Flag-P2A-TagCFP, myl7:mCherry)nub56Tg |
Available from M. Hibi lab |
| Genetic reagent (D. rerio) | Tg(UAS-hsp70l:GCaMP6s) | Muto et al., 2017 | Tg(5xUAS-hsp70l:GCaMP6s) nkUAShspzGCaMP6s13aTg | |
| Genetic reagent (D. rerio) | Tg(elavl3:Flamindo2) | This paper | Tg(elavl3:Flamindo2)nub57TG | Available from M. Hibi lab |
| Cell line (hybrid of Rattus norvegicus and Mus musculus) |
ND7/23 | Wood et al., 1990 | ECACC 92090903 | https://www.saibou.jp/en/reagents/ |
| Recombinant DNA reagent | pCS2+GtCCR4-3.0-EYFP | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pCS2+GtCCR4- MT-P2A-TagCFP |
This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pCS2+CrChR2 [T159C]-mCherry |
This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pBH-R1-R2 | Accompanying paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L1-5xUAS-hsp70l-R5 | Accompanying paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-GtCCR4-MT-P2A-TagCFP-SV40pAS-L2 | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-KnChR-3.0-EYFP-SV40pAS -L2 | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-GtACR1-EYFP-SV40pAS-L2 | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-CrChR2[T159C]-mCherry-SV40pAS-L2 | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-BeGC1-EGFP-SV40pAS-L2 | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-BeGC1-EGFP-SV40pAS-L2 | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-bPAC-MT-T2A-tDimer-SV40pAS-L2 | This paper | Available from M. Hibi lab | |
| Recombinant DNA reagent | pENTR L5-OaPAC-Flag-P2A-TagCFP-SV40pAS-L2 | This paper | Available from M. Hibi lab | |
| Antibody | Mouse monoclonal anti-Flag antibody | Sigma-Aldrich | Cat# F3165; RRID:AB_259529 | Dilution 1:500 |
| Antibody | Mouse monoclonal anti-Myc tag antibody | Santa Cruz Biotechnology | Cat# sc-40; RRID:AB_627268 | Dilution 1:500 |
| Antibody | Rat monoclonal anti-GFP antibody | Nacalai Tesque, Inc. | Cat# 04404-84; RRID:AB_10013361 | Dilution 1:500 |
| Antibody | Rabbit polyclonal anti-DsRed antibody | Takara Bio | Cat# 632496; RRID:AB_10013483 | Dilution 1:500 |
| Antibody | Goat CF488A anti-mouse IgG antibody | Biotium, Inc | Cat# 20018; RRID:AB_10557263 | Dilution 1:500 |
| Antibody | Goat CF488A anti-rat IgG antibody | Biotium, Inc | Cat# 20023; RRID: AB_10557403 | Dilution 1:500 |
| Antibody | Goat CF568 anti-rabbit IgG antibody | Biotium, Inc | Cat# 20103; RRID:AB_10558012 | Dilution 1:500 |
| Chemical compound, drug | tricaine methanesulfonate | Nacalai Tesque, Inc | Cat# 01916-32 | |
| Chemical compound, drug | low gelling temperature Type VII-A | Sigma-Aldrich | A0701 | |
| Chemical compound, drug | pentylenetetrazol | Sigma-Aldrich | Cat# P6500 | |
| Software, algorithm | SutterPatch 1.1.1 | Sutter Instrument Co. | https://www.sutter.com/AMPLIFIERS/SutterPatch.html | |
| Software, algorithm | pCLAMP10.6 | Molecular Devices | https://support.moleculardevices.com/s/article/Axon-pCLAMP-10-Electrophysiology-Data-Acquisition-Analysis-Software-Download-Page | |
| Software, algorithm | PolyScan2 | Mightex | ||
| Software, algorithm | StreamPix7 | NorPix Inc | ||
| Software, algorithm | LabVIEW | National Instruments | 2015 | https://www.ni.com/ja-jp.html |
| Software, algorithm | GraphPad Prism5 | GraphPad Software | https://www.mdf-soft.com/ | |
| Software, algorithm | VSDC Free Video Editor 6.4.7.155 | FLASH-INTEGRO LLC | https://www.videosoftdev.com/jp | |
| Software, algorithm | Microsoft Movies & TV | Microsoft Corp. | https://apps.microsoft.com/store/detail/movies-tv/9WZDNCRFJ3P2 | |
| Software, algorithm | QuickTime player 10.5 | Apple Inc. | https://quicktime.softonic.jp/ | |
| Software, algorithm | Fiji/ImageJ | National Institutes of Health (NIH) | http://fiji.sc/ | |
| Software, algorithm | R 3.6.1 and 4.2.1 | https://www.r-project.org/ | ||
| Software, algorithm | ggplot2 3.2.0 of R | https://ggplot2.tidyverse.org | ||
| Software, algorithm | nlme 3.1–162 of R | https://cran.r-project.org/web/packages/nlme/index.html | ||
| Software, algorithm | Bonsai | Lopes et al., 2015 | https://open-ephys.org/bonsai | |
| Software, algorithm | Python 3.5.6 | Python Software Foundation | https://www.python.org/ | |
| Software, algorithm | Tracker Video Analysis and Modeling Tool for Physics Education 5.1.5 | https://physlets.org/tracker/ | ||
| Software, algorithm | Microsoft Excel for Mac, ver. 16.74 | Microsoft | ||
| Software, algorithm | HB_frequency.py | This paper | Source code file |