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. 2023 Aug 17;12:e80152. doi: 10.7554/eLife.80152

Appendix 1—table 1. Synaptic plasticity protocol parameters.

To fit the data from publications displaying a parameter interval (e.g. 70–100), we used a value within the provided limits. Otherwise, we depict in parentheses the value used to fit to the data. Further information is available in the github code and Appendix 1—table 3. Some of these experiments did not control AP generation following EPSP stimulation: Mizuno et al., 2001, Dudek and Bear, 1992 Dudek and Bear, 1993. We modeled this effect, described below. In addition, Tigaret et al., 2016 used GABA(A)r blockers, which we modelled by setting the GABAr conductance to zero. Also, Mizuno et al., 2001 LTD protocol used a partial NMDA blocker, which we modelled by reducing NMDA conductance by 97%.

Experiment Paper Repetitions Freq (Hz) Age (days) Temp. (C) [Ca2+]o(mM) [Mg2+]o(mM)
STDP Tigaret et al., 2016 300 5 56 35 2.5 1.3
STDP Inglebert et al., 2020 100, positive delays 0.3 21 (30.45) 1.3—3 Ca/1.5
STDP Inglebert et al., 2020 150, negative delays 0.3 14 30 1.3—3 Ca/1.5
STDP Meredith et al., 2003 20 0.2 9—45 24—28 2 2
STDP Wittenberg and Wang, 2006 70—100 5 14—21 (22.5–23) 2 1
pre-burst Tigaret et al., 2016 300 and 900 3 and 5 56 35 2.5 1.3
FDP Dudek and Bear, 1992 900 1—50 35 35 2.5 1.5
FDP Dudek and Bear, 1993 900 1 7—35 35 2.5 1.5
TBS Dudek and Bear, 1993 3—4 (5) epochs 4Pre at 100 Hz, 10 x at 5 Hz 6, 14 and 17 35 2.5 1.5
LFS Mizuno et al., 2001 1—600 1 12—28 (26.5–31) 2.4 0