Table 6. Postsynaptic calcium dynamics parameters.
Note that the buffer concentration, calcium diffusion coefficient, calcium diffusion time constant and calcium permeability were considered free parameters to adjust the calcium dynamics.
Name | Value | Reference |
---|---|---|
Buffer and dye | ||
Association buffer constant | Bartol et al., 2015 | |
Dissociation buffer constant | Bartol et al., 2015 | |
Generic buffer concentration | (Bartol et al., 2015) | |
Calcium dynamics | ||
Calcium baseline concentration |
(Maravall et al., 2000) |
|
Calcium decay time | 0.05–0.5 s with dye (Maravall et al., 2000) therefore < 0.05–0.5 s undyed (unbuffered) | |
Calcium diffusion coefficient | (Bartol et al., 2015; Holcman et al., 2005) | |
Calcium diffusion time constant |
(Holcman et al., 2005) |
|
GHK equation | ||
Temperature | converted to Kelvin in the Equation 14 given the protocol | |
Faraday constant | Hille, 1978 | |
Gas constant | Hille, 1978 | |
Calcium permeability | adjusted to produce 3μM Calcium in response to a Glu release supplementary file from Chang et al., 2017 | |
Calcium ion valence | Hille, 1978 |