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. 2023 Aug 4;11:1231030. doi: 10.3389/fchem.2023.1231030

TABLE 2.

Binding score and interactions of compound 7, as compared to the co-crystallized ligand Sorafenib, toward the active cavity of VEGFR2 protein.

Protein (PDB code) Compound Binding score (kcal/mol) Hydrophobic interactions Hydrophilic interactions Distance (A)
VEGFR2 (4asd) Sorafenib −15.29 Leu840 Val848 Cys919 3.10
Ala866 Ile888 Cys919 2.88
Leu889 Ile892 Cys1045 3.32
Val898 Val899 Asp1046 2.79
Val916 Phe918 Glu885 3.34
Leu1019 Ile1025 Glu885 2.58
Leu1035 Ile1044
Phe1047
7 −14.71 Val846 Ile886 Glu883 3.35
Leu887 Ile890 Glu833 2.71
Val897 Val912 Asp1044 2.80
Val914 Ile1023 Asp1044 3.57
Ile1042 Phe1045 Cys1043 3.49
Ile886 3.93