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. Author manuscript; available in PMC: 2023 Aug 21.
Published in final edited form as: Cell Rep. 2023 Jul 9;42(7):112768. doi: 10.1016/j.celrep.2023.112768

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse monoclonal anti-NPAT clone 27 Santa Cruz, BD Biosciences sc-136007, 611344
Rabbit anti-SLBP Abcam ab221166
Rabbit anti-CASP8AP2 (FLASH) Sigma Aldrich HPA053573
Rabbit anti-Lsm11 Sigma Aldrich HPA039587
Rabbit anti-Eri1 Thermo Fisher 14592-1-AP
Rabbit polyclonal anti-NASP Sigma Aldrich HPA030520
Rabbit monoclonal anti-Cyclin E1 EP435E abcam ab33911
Rabbit monoclonal anti-Cyclin E2 EP454Y abcam ab40890
Mouse anti-Cyclin A2 Santa Cruz sc-271682
Rabbit polyclonal anti-phospho-NPAT T1270 Thermo Fisher-custom antibody N/A
Alexa Fluor 488 anti-mouse secondary Thermo Fisher A-11029
Alexa Fluor 546 anti-mouse secondary Thermo Fisher A-11030
Alexa Fluor 647 anti-mouse secondary Thermo Fisher A-21236
Alexa Flour 546 anti-rabbit secondary Thermo Fisher A-11035
Alexa Fluor 647 anti-rabbit secondary Thermo Fisher A-21245

Chemicals, peptides, and recombinant proteins

PF-07104091 ChemieTek CT-PF0710
PF-06873600 SelleckChem S8816
Palbociclib (PD-0332991) SelleckChem S1116
RO-3306 SelleckChem S7747
Aphidicolin Cell Signaling 32774
ddUTP-ATTO550 Jena Bioscience NU-1619-550
Terminal Deoxynucleotidyl Transferase Thermo Fisher EP0161
DharmaFECT 1 Dharmacon T-2001-02

Critical commercial assays

ViewRNA ISH Cell Assay Kit Thermo Fisher QVC0001
Click-iT EdU Cell Proliferation Kit for Imaging Fisher Scientific C10340

Experimental models: Cell lines

MCF10A ATCC CRL-10317
RPE-hTERT ATCC CRL-4000

Software and algorithms

MATLAB R2020a Mathworks N/A
Adobe Illustrator 2022 Adobe N/A
ImageJ Fiji N/A
Tracking code Meyer Lab https://github.com/scappell/Cell_tracking.
Imaris Analysis Oxford Instruments N/A

Deposited data

Imaging Data Mendeley Data https://doi.org/10.17632/d2b55pmjmk.1

Oligonucleotides

siNPAT Horizon Discovery J-019599-10-0002
siFLASH Horizon Discovery J-012413-05-0002
siLsm11 Horizon Discovery J-018455-17-0002
siCCNE1 Horizon Discovery M-003213-02-0005
siCCNE2 Horizon Discovery M-003214-02-0005
siCCNA2 Horizon Discovery M-003205-02-0005
siSLBP Horizon Discovery J-012286-05-0002
siNASP Horizon Discovery J-011740-13-0002
siEri1 Horizon Discovery J-021497-09-0002
siControl Horizon Discovery D-001810-02-05
HIST2H4A Thermo Fisher VA6-3174283-VC
NPAT Thermo Fisher VA6-3172751-VC
CASP8AP2 (FLASH) Thermo Fisher VA6-3175253-VC
SLBP Thermo Fisher VA6-3174137-VCP
See Table S1 for oligonucleotides used for nascent histone RNA FISH Integrated DNA Technologies N/A

Other

Stellaris® RNA FISH Hybridization Buffer Biosearch Technologies SMF-HB1-10
Stellaris® RNA FISH Wash Buffer A Biosearch Technologies SMF-WA1-60
Stellaris® RNA FISH Wash Buffer B Biosearch Technologies SMF-WB1-20
DMEM/F-12 phenol red free Thermo Fisher 11039047