Table 1.

List of notations and abbreviations used

TR	Transcription regulator
MR	Master Regulator
GRN	Gene Regulatory Network
INV	Immunologic Constant of Rejection
NES	Normalized Enrichment Score
MRA	Master Regulator Analysis
TCGA	The Cancer of Genome Atlas
PRECOG	Prediction of Clinical Outcomes for Genomics profiles
RGBM	Regularized Gradient Boosting Machines
GSEA	Gene Set Enrichment Analysis
FGSEA	Fast Gene Set Enrichment Analysis
GSVA	Gene Set Variation Analysis
VIPER	Virtual inference of protein activity by enriched regulons
INV-H	Highest expression of INV genes
INV-L	Lowest expression of INV genes
INV-M	Medium expression of INV genes