pBud-C. elegans XBP-1 cloning | |
xbp-1 | Forward: 5’- CTGAGGTACC ATGAGCAACTATCCAAAACG-3’ Reverse: 5’- GTACAGATCTTTAATTTTGGAAGAAATTTAGGTC-3’ |
cloning IRE1 chimera with C. elegans linker or with human linker | |
C. elegans IRE1 cytosolic domains | Forward: 5’- TCTGTACAAGCAATGTGGAAGACAATGGGATCAAC-3’ Reverse: 5’-GGATGAGTACCCGAGGTTAACAC-3’ |
Forward 2: 5’-GTGTTAACCTCGGGTACTCATCC-3’ Reverse 2: 5’-ATACAGAATTCTTAATCGGTGTTCGGATTTGATTTC-3’ | |
human IRE1 linker | Forward: 5’-TCTGTACAAGACTAGTCAGCTGC-3’ Reverse: 5’-GATCTAGAGGAAATTTTCCCAACTATCACC-3’ |
C. elegans kinase domain | Forward: 5’-AGTCTAGATATAGTCCATCAGATATTCTTGGAAC-3’ |
pTight-DAF-7-mCherry cloning | |
human IGF2 signal peptide | Forward: 5’-TTAGCGGCCGCATGGGAATCCCAATGGGGAAGTCGATGC-3’ Reverse: 5’-TATAGGTACCAGCAATGCAGCACGAGGCGAAGG-3’ |
mCherry | Forward: 5’-TCATGGTACCGTGAGCAAGGGCGAGGAGGATAAC −3’ Reverse: 5’-TACTAGATCTTCCTTGTACAGCTCGTCCATGCC-3’ |
DAF-7 propeptide | Forward: 5’-CATGTGTACAAGAACTGCACCAACTCAGGTGTTTG-3’ Reverse: 5’-TACTAGATCTTCTGAGCAACCGCATTTCTTGGCG-3’ |
Site-directed mutagenesis | |
DAF-7 C942T | Forward: 5’- CTGAGATCGGATACTGTTGCCATCCAACCGAG −3’ Reverse: 5’- CTCGGTTGGATGGCAACAGTATCCGATCTCAG −3’ |
DAF-7 G914C | Forward: 5’-CCTGAGATCGGATACTCCTGCCATCCA-3’ Reverse: 5’-TGGATGGCAGGAGTATCCGATCTCAGG-3’ |
RT-PCR | |
human Xbp1 | Forward: 5’-AAACAGAGTAGCAGCTCAGACTGC-3’ Reverse: 5’-TCCTTCTGGGTAGACCTCTGGGAG-3’ |
C. elegans xbp | Forward: 5’-CGTCGTCTACGAAGAAGAAGTCGTC-3’ Reverse: 5’-GATGATAGTTAGATACATATCCACACTG-3’ |
qPCR primers | |
Rpl19 | Forward: 5’-AAAACAAGCGGATTCTCATGGA-3’ Reverse: 5’-TGCGTGCTTCCTTGGTCTTAG-3’ |
Blos1 | Forward: 5’-CAAGGAGCTGCAGGAGAAGA-3’ Reverse: 5’-GCCTGGTTGAAGTTCTCCAC-3’ |
Gapdh | Forward: 5’-CTGGGCTACACTGAGCAGG-3’ Reverse: 5’-AAGTGGTCGTTGAGGGCAATG-3’ |
C.elegans actin | Forward: 5’-ATCACCGCTCTTGCCCCATC-3’ Reverse: 5’-GGCCGGACTCGTCGTATTCTTG-3’ |
daf-7 | Forward: 5’-CGCTACAAAGGGATCCGAAC-3’ Reverse: 5’-CCCGTCGAGCATTGCCTTG-3’ |
Forward: 5’-GATCTACGATCTGTGCAAAGC-3’ Reverse: 5’-CGAGTACTCGTTCGGCGGT-3’ |
|
acs-20 | Forward: 5’-TCATAGAGTTGGAGCAAGACTTG-3’ Reverse: 5’-CTGAAGGAGCATCCAT GAT ACC-3’ |
ins-1 | Forward: 5’-AACCGCTTTCAAACGTTCCG-3’ Reverse: 5’-CGTCCTGATTGCAGCAGAATG-3’ |