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. 2023 Jul 28;52(33):11679–11690. doi: 10.1039/d3dt02037a

Summary of the docking results between 11+ and the different DNA structures, including the number of minor (minG) and major (MajG) grooves and other conformations and the lowest (and average) binding energy of the different conformations.

PDB structure N minG (%) ΔGminG (kcal mol−1) N MajG (%) ΔGMajG (kcal mol−1) Other N other (%) ΔGother (kcal mol−1)
1BNA (native) 59 −5.62 (−4.65) 41 −5.38 (−4.77) 0
5T4W (minor groove) 79 −6.41 (−5.39) 21 −5.68 (−5.12) 0
1G3X (intercalator) 23 −8.89 (−8.23) 0 Int. + minG 76 −8.95 (−8.63)
Int. + MajG 1 −6.42