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. 2023 Aug 10;4(8):707–720. doi: 10.1038/s43016-023-00814-w

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — Bayesian evolutionary phylogenetic tree reconstructing the phylogeny of contigs containing the clinically important ARG bla_NDM-1 and MGE ISAba125. Sample IDs (for example, LNPCJFT2-17) are given under the phylogenetic tree. The source type and location of the samples are indicated by coloured strips. The gene structure of each sample is shown below the tree with MGEs coloured blue, ARGs coloured green and other genes coloured yellow. The ARG ble is co-located with bla_NDM-1 in all contigs.