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. 2023 Aug 23;12:giad059. doi: 10.1093/gigascience/giad059

Table 3:

The demographic parameters of orangutan history with migration for structure (1, 1) (ORAN-STRUCT-MIG model) inferred with different engines in GADMA2. Ground truth includes the simulated parameter values that were obtained from the original study by Locke et al. [30]. Momi2 engine was excluded as it does not support continuous migrations. Log-likelihood values are not comparable between different engines

∂a∂i moments momentsLD
Log-likelihood Ground truth −1,220 −1,106 −53
Parameters
Nanc 17,934 17,925 17,854 17,685
Inline graphic 10,617 10,432 10,498 10,529
Inline graphic 7,317 7,492 7,355 7,155
NBor 8,805exp 9,282exp 8,892exp 8,592exp
NSum 37,661exp 39,343exp 37,443exp 36,740exp
m BorSum( × 10−5) 0.66 0.67 0.67 0.69
m SumBor( × 10−5) 1.10 1.07 1.09 1.13
Tsplit (gen.) 20,157 20,812 20,183 19,869

Nanc, size of the ancestral population; Inline graphic, size of Pongo pygmaeus at split; Inline graphic, size of Pongo abelii at split; NBor, modern size of Pongo pygmaeus; NSum, modern size of Pongo abelii; mBorSum, migration rate from Pongo pygmaeus to Pongo abelii; mSumBor, migration rate from Pongo abelii to Pongo pygmaeus; Tsplit, time of divergence.

exp Exponential growth.