Table 3:
The demographic parameters of orangutan history with migration for structure (1, 1) (ORAN-STRUCT-MIG model) inferred with different engines in GADMA2. Ground truth includes the simulated parameter values that were obtained from the original study by Locke et al. [30]. Momi2 engine was excluded as it does not support continuous migrations. Log-likelihood values are not comparable between different engines
| ∂a∂i | moments | momentsLD | ||
|---|---|---|---|---|
| Log-likelihood | Ground truth | −1,220 | −1,106 | −53 |
| Parameters | ||||
| Nanc | 17,934 | 17,925 | 17,854 | 17,685 |
|
10,617 | 10,432 | 10,498 | 10,529 |
|
7,317 | 7,492 | 7,355 | 7,155 |
| NBor | 8,805exp | 9,282exp | 8,892exp | 8,592exp |
| NSum | 37,661exp | 39,343exp | 37,443exp | 36,740exp |
| m Bor − Sum( × 10−5) | 0.66 | 0.67 | 0.67 | 0.69 |
| m Sum − Bor( × 10−5) | 1.10 | 1.07 | 1.09 | 1.13 |
| Tsplit (gen.) | 20,157 | 20,812 | 20,183 | 19,869 |
Nanc, size of the ancestral population;
, size of Pongo pygmaeus at split;
, size of Pongo abelii at split; NBor, modern size of Pongo pygmaeus; NSum, modern size of Pongo abelii; mBor − Sum, migration rate from Pongo pygmaeus to Pongo abelii; mSum − Bor, migration rate from Pongo abelii to Pongo pygmaeus; Tsplit, time of divergence.
exp Exponential growth.