Table 1. Summary of the Adducts Associated with PEX in Liver Microsomes and Human Primary Hepatocytesa.
| RT (min) | observed m/z [M + H]+ | calculated m/z [M + H]+ | mass error (ppm) | predicted molecular formula | identification | metabolite ID | source |
|---|---|---|---|---|---|---|---|
| 10.96 | 418.1036 | 418.1036 | 0.00 | C20H15ClF3N5 | pexidartinib | PEX | HLM, MLM, PHH |
| 8.86 | 723.1731 | 723.1722 | 1.24 | C30H30ClF3N8O6S | PEX + GSH | M1 | HLM, MLM, PHH |
| 8.98 | 723.1731 | 723.1722 | 1.24 | C30H30ClF3N8O6S | PEX + GSH | M2 | HLM, MLM, PHH |
| 8.48 | 739.1682 | 739.1672 | 1.35 | C30H30ClF3N8O7S | PEX + O + GSH | M3 | HLM, MLM |
| 9.02 | 739.1677 | 739.1672 | 0.68 | C30H30ClF3N8O7S | PEX + O + GSH | M4 | HLM, MLM |
| 9.58 | 739.1678 | 739.1672 | 0.81 | C30H30ClF3N8O7S | PEX + O + GSH | M5 | HLM, MLM |
| 8.11 | 741.1839 | 741.1828 | 1.48 | C30H32ClF3N8O7S | PEX + O + 2H + GSH | M6 | HLM, MLM, |
| 8.64 | 757.1783 | 757.1777 | 0.79 | C30H32ClF3N8O8S | PEX + 2O + 2H + GSH | M7 | HLM, MLM |
| 6.27 | 559.1588 | 559.1581 | 1.25 | C22H25ClF3N6O6S | cleaved right + GSH | M8 | HLM, MLM |
| 7.51 | 472.1055 | 472.1052 | 0.64 | C18H22ClN5O6S | cleaved left + GSH | M9 | HLM, MLM, PHH |
| 3.88 | 582.1536 | 582.1532 | 0.69 | C23H28ClN7O7S | amine + O + 2H + GSH | M10 | HLM, MLM |
| 8.53 | 594.1301 | 594.1296 | 0.84 | C25H24ClF3N7O3S | PEX + Cys + Gly | M11 | HLM, MLM, PHH |
| 9.50 | 481.1363 | 481.1361 | 0.42 | C21H20ClF3N6O2 | PEX + O + 2H + NH2OMe | M12 | HLM, MLM |
| 10.82 | 463.1265 | 463.1261 | 0.86 | C21H18ClF3N6O | PEX + NH2OMe-2H | M13 | HLM, MLM |
| 4.74 | 322.1065 | 322.1065 | 0.00 | C14H16ClN5O2 | amine + O + 2H + NH2OMe | M14 | HLM, MLM |
| 7.09 | 304.0959 | 304.0965 | –1.97 | C14H14ClN5O | amine + NH2OMe-2H | M15 | HLM, MLM |
| 10.87 | 311.1113 | 311.1114 | –0.32 | C14H13F3N4O | cleaved right + NH2OMeb | M16 | HLM, MLM |
| 12.41 | 205.0586 | 205.0583 | 1.46 | C8H7F3N2O | nicotinaldehyde + NH2OMe | M17 | HLM, MLM |
| 12.24 | 210.0430 | 210.0429 | 0.48 | C9H8ClN3O | cleaved left + NH2OMeb | M18 | HLM, MLM |
PEX, pexidartinib; GSH, glutathione; NH2OMe, methoxyamine; O+, monohydroxylation; 2O+, dihydroxylation; O+2H+, monohydroxylation & hydrogenation; Cys, cysteine; Gly, glycine; HLM/MLM, human/mouse liver microsomes; PHH, primary human hepatocytes; Amine, N-dealkylated PEX.
See Figure S1 for cleaved moieties.